Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq335 102 7e-17
>seq335
Length=1594555
Score = 102 bits (112), Expect = 7e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| | || |||| ||| | |||||||| ||||||||||| ||||| |
Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906442
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | |||||||||||||| || ||| | || || | ||||||||| ||
Sbjct 906441 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906382
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGG--GCTCCG 21126
| ||||||||| || || || || || | ||| ||| | ||| ||| ||
Sbjct 906381 ATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGT---CGGAAGCTTCG 906325
Query 21127 -TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||| | ||| ||||| || || ||||| ||||||||||| || ||||||
Sbjct 906324 ACTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/232 (70%), Gaps = 3/232 (1%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGA-ATGTTATAGTCC 21005
|||| ||||| || | || || | ||| | || || || ||||| ||||| || ||
Sbjct 906046 TTCCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATCA 905987
Query 21006 GCCAGGGTTTGGGCG-TCCT-CCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCA 21063
| |||||||| || |||| |||| ||||| || ||| | || || | || |||||
Sbjct 905986 GACAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAG 905927
Query 21064 CGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCT 21123
|| | |||||| ||||| ||||| ||| || | ||| ||||||| | ||
Sbjct 905926 GAGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCT 905867
Query 21124 CCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
| ||||| ||||||||||| || || || ||||||||||| ||||||||
Sbjct 905866 CTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/231 (69%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| ||||| || | ||| || | ||| | ||| |||||||| |||||||| ||||| |
Sbjct 906275 TTCCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAG 906216
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | |||| || | ||||| || ||| | ||||| | ||||||||| |
Sbjct 906215 AAAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAG 906156
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||||| ||||| || || ||| || | | | || || || |||
Sbjct 906155 GAATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTA 906096
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTA-ACGTTTTGACAAATATTTGCATT 21176
||||| ||||||||||| || || | | ||||||| || |||||||||
Sbjct 906095 CTTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCATT 906045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422227817960168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |