Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq335 102 7e-17 >seq335 Length=1594555 Score = 102 bits (112), Expect = 7e-17 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | || |||| ||| | |||||||| ||||||||||| ||||| | Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906442 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||||||||||||| || ||| | || || | ||||||||| || Sbjct 906441 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906382 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGG--GCTCCG 21126 | ||||||||| || || || || || | ||| ||| | ||| ||| || Sbjct 906381 ATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGT---CGGAAGCTTCG 906325 Query 21127 -TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | ||| ||||| || || ||||| ||||||||||| || |||||| Sbjct 906324 ACTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/232 (70%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGA-ATGTTATAGTCC 21005 |||| ||||| || | || || | ||| | || || || ||||| ||||| || || Sbjct 906046 TTCCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATCA 905987 Query 21006 GCCAGGGTTTGGGCG-TCCT-CCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCA 21063 | |||||||| || |||| |||| ||||| || ||| | || || | || ||||| Sbjct 905986 GACAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAG 905927 Query 21064 CGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCT 21123 || | |||||| ||||| ||||| ||| || | ||| ||||||| | || Sbjct 905926 GAGGGATGCCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCT 905867 Query 21124 CCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | ||||| ||||||||||| || || || ||||||||||| |||||||| Sbjct 905866 CTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| ||||| || | ||| || | ||| | ||| |||||||| |||||||| ||||| | Sbjct 906275 TTCCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAG 906216 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | |||| || | ||||| || ||| | ||||| | ||||||||| | Sbjct 906215 AAAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAG 906156 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||| ||||| || || ||| || | | | || || || ||| Sbjct 906155 GAATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTA 906096 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTA-ACGTTTTGACAAATATTTGCATT 21176 ||||| ||||||||||| || || | | ||||||| || ||||||||| Sbjct 906095 CTTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCATT 906045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422227817960168