Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq410 154 2e-32 seq335 143 3e-29 seq158 122 9e-23 >seq410 Length=4553683 Score = 154 bits (170), Expect = 2e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 116700 AGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGC 116759 |||||| | |||||| | ||| |||| ||||| ||| | || |||||| ||| || Sbjct 2615735 AGGACATGGCTGACTGGAACCGCCTGAATGACAATGAGAGGCACTTCATCTCGCATGTTT 2615794 Query 116760 TGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTC 116819 |||| || || || ||| || || || ||||| ||||||||||| ||||||||| | Sbjct 2615795 TGGCATTCTTTGCTGCCTCGGATGGTATTGTCAATGAGAATCTGGTTGAGCGTTTCAGCC 2615854 Query 116820 AGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACG 116879 |||| ||||||||| | ||||| || |||||||| ||||| ||| | ||||| || ||| Sbjct 2615855 AGGAAGTGCAGGTGACTGAGGCTCGCTGCTTCTATGGCTTCCAGGTGGCCATTGAAAACA 2615914 Query 116880 TGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 | ||||| |||||||| || ||||| ||||| ||| Sbjct 2615915 TTCACTCTGAAATGTACTCCCTTCTCATTGACACCTAC 2615952 Score = 123 bits (136), Expect = 3e-23 Identities = 164/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005 |||| ||||||||||| || | || || ||| ||||||| | ||||| ||| || Sbjct 2616059 TGTTCAACGCCATCGAAACACTTCCCTGTGTCGCCAAGAAGGCGAACTGGGCCCTGAACT 2616118 Query 117006 GGATCGCCGGCA-GAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063 |||| | | || || || || | || | ||| || || | |||||||| || ||||| Sbjct 2616119 GGAT--CAGTCACGATAGCGCGACGTTTGCCGAACGAGTGATTGCCTTCGCTGCAGTCGA 2616176 Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123 ||| |||| || |||||||| || ||||| || ||||| ||||| || || || || Sbjct 2616177 GGGAATCTTTTTCAGCGGCAGTTTTGCTGCCATTTTCTGGCTGAAGAAGCGTGGTCTTAT 2616236 Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 ||| || || || |||||||| || ||||| || |||||||||| Sbjct 2616237 GCCTGGACTTACCTTCAGCAATGAACTCATTTCTAGGGACGAGG 2616280 >seq335 Length=1594555 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || || |||||||||||| | || || ||||| || Sbjct 906503 ATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTCC 906562 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| |||||| ||||||| || || || |||||||| | ||||| Sbjct 906563 GACACTATCGAAAACG-TCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906621 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || ||||||||||| || | | ||||| |||||||| Sbjct 906622 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906681 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| || || ||| ||||||| ||||| || ||||| Sbjct 906682 CATTCAAAAAGAGTCCACGCTTCATCTGGTCTTGCG 906717 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || ||||| | || || |||||||| ||| | || |||||||| | Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333 Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | ||||| |||||| ||||||| || || || |||||||| | |||| Sbjct 906334 CGACACTATCGAAAACG-TCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACC 906392 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| || || ||||||||||| || | | ||||| ||||||| Sbjct 906393 AGCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACA 906452 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||| || || ||| ||||||| ||||| || | || |||| || ||| Sbjct 906453 ACATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGGC 906502 Score = 116 bits (128), Expect = 4e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGT-AAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA 40747 ||||||||| ||||| |||||| || || || || ||||| || | || || || ||| Sbjct 906045 AATGCAAATTTTCGTCAAAAACTCTGACTGGTAAGACCATTACTCTGGAAGTAGAGGCCT 906104 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||||| | | ||| | || | ||||||| |||||||| || || || | |||| Sbjct 906105 CCGACACCATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGAATTCCTCCAGACC 906164 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || |||| || || ||||| | || |||| ||| || || ||||||| Sbjct 906165 AGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGACGGGCGTACACTTTCTGACTACA 906224 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||||||| | || || ||||| || Sbjct 906225 ACATTCAGAAGGAGTCAACTCTTCATCTCGT 906255 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || | || || || ||||||||| | || |||||||| | Sbjct 905130 AATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTCGAAGCTTC 905189 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| |||||| ||||| | ||||||||||| ||||| | ||||| Sbjct 905190 AGACACAATTGAAAATGTCAAGGCCAAAATCCAGGACAAAGAGGGTATCCCTCCAGACCA 905249 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || ||||| ||||| || || | || || || |||||||| Sbjct 905250 GCAGCGTCTGATTTTTGCTGGCAAGCAGCTTGAAGATGGACGTACTCTTTCTGACTACAA 905309 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| | || || || Sbjct 905310 TATTCAGAAGGAGTCAACTCTTCA 905333 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || | || || || ||||||||| | || |||||||| | Sbjct 905358 AATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTCGAAGCTTC 905417 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| |||||| ||||| | ||||||||||| ||||| | ||||| Sbjct 905418 AGATACAATTGAAAATGTCAAGGCCAAAATCCAGGACAAAGAGGGTATCCCTCCAGACCA 905477 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || ||||| ||||| || |||| | || || || ||||| Sbjct 905478 GCAGCGTCTGATTTTTGCTGGCAAGCAGCTTGAAGACGGAAGAACTCTTTCTGATTACAA 905537 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||| || | ||||| ||||| || Sbjct 905538 CATTCAGAAAGAATCAACGCTCCATCTTGT 905567 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || ||||| | || |||||||||||||| | || || || ||| Sbjct 904900 AAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGCC 904959 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| |||| | ||||| | ||||||||||| || || | || Sbjct 904960 TCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATTCCTCCAGAT 905019 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| || || ||||| | || || | || || || |||||| Sbjct 905020 CAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTAC 905079 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 || || ||||||||| | || || || Sbjct 905080 AATATTCAGAAGGAGTCAACTCTTCA 905105 >seq158 Length=288468 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| ||||||||||| | || ||||| || || Sbjct 89877 ATGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCC 89936 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | |||| ||||||| ||||||||||| ||||| | |||||| Sbjct 89937 GACACGATCGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCACCAGACCAG 89996 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| ||| || ||||| | || || | ||||| | ||||| ||| Sbjct 89997 CAGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGTCGCACATTGTCAGACTATAAC 90056 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || || || || ||||||||||||| || ||||| Sbjct 90057 ATTCAAAAAGAATCCACGCTGCATCTGGTATTGCG 90091 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || |||||||||||||| | || ||||| ||| | Sbjct 91701 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91760 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | ||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct 91761 GATACGATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCGCCAGACCAG 91820 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || || ||||| |||| || | || || ||| ||||||||| Sbjct 91821 CAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCTCCGACTACAAT 91880 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| | || || || | || || || | ||||| || Sbjct 91881 ATCCAGAAAGAGTCGACTCTCCACTTGGTCTTACGTCTTAGGGGTGG 91927 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| ||||||||| | || || || || | Sbjct 89421 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGGCTTCT 89480 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || |||| |||||||||||||| ||| | |||||| Sbjct 89481 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAGGGCATTCCCCCAGACCAG 89540 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| ||| || || ||||| || || | || || || ||||||||| Sbjct 89541 CAGAGGTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGACGTACTCTGTCCGACTACAAT 89600 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || || || || | || || || | || ||||| ||||| || ||| Sbjct 89601 ATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGAGGC 89648 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || |||||||||||||| | || ||||| || || Sbjct 90333 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90392 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | ||||| |||| | || |||| || || || || ||||| | ||||| Sbjct 90393 GATACCATCGAAAACG-TCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCA 90451 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | || | ||| || || || || || || | || || || ||| ||||| Sbjct 90452 GCAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAA 90511 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||| ||| |||| || ||| | || ||| | | ||||| ||| Sbjct 90512 CATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACTTAGGGGAGGC 90560 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || |||||||||||||| | || ||||| || || Sbjct 90789 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90848 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | ||||| |||| | || |||| || || || || ||||| | ||||| Sbjct 90849 GATACCATCGAAAACG-TCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCA 90907 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | || | ||| || || || || || || | || || || ||| ||||| Sbjct 90908 GCAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAA 90967 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||| ||| |||| || ||| | || ||| | | ||||| ||| Sbjct 90968 CATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACTTAGGGGAGGC 91016 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || |||||||||||||| | || ||||| || || Sbjct 91245 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 91304 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | ||||| |||| | || |||| || || || || ||||| | ||||| Sbjct 91305 GATACCATCGAAAACG-TCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCA 91363 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | || | ||| || || || || || || | || || || ||| ||||| Sbjct 91364 GCAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAA 91423 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||| ||| |||| || ||| | || ||| | | ||||| ||| Sbjct 91424 CATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACTTAGGGGAGGC 91472 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || ||||| || |||||||| || || | || |||||||| | Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || || | |||||| ||||||| |||||||| || || || | || || Sbjct 89709 GATACGATTGAGAATG-TCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCA 89767 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | || || || || || || || | ||||| | |||||||| Sbjct 89768 GCAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAA 89827 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || ||||| |||| || || || || Sbjct 89828 CATTCAAAAGGAATCCACACTTCACCTTGT 89857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515179927416480