Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq337 87.8 3e-12 >seq337 Length=921547 Score = 87.8 bits (96), Expect = 3e-12 Identities = 170/246 (69%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 189386 AATGATCCTAGAAAGTATATATATTCCATTAAAC-AACTCGAAAAAGCGGAAACTCATGA 189444 |||||| ||| | ||||| ||| | ||| ||| || | ||||| | ||||||||| Sbjct 71098 AATGATAAAAGAGACTATATTTATAC-ATTGAACGAATTGGAAAATGGATTAACTCATGA 71040 Query 189445 TCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTT 189504 | | | ||||| || | |||| || | || | ||||||||||| || | ||| | Sbjct 71039 TGATTTGTGGAATGCAGCTGAAATACAATTAGTAAAGGAAGGAAAAATCCACGGATTTCT 70980 Query 189505 ACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAG 189564 |||||||||||||||| || || | ||||||||| |||||| || || || || | Sbjct 70979 TAGAATGTATTGGGCTAAAAAAATTTTAGAATGGACTGAAACACCAGATGATGCCTTAAA 70920 Query 189565 TTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACG 189623 | || ||| |||| | ||||| | || || ||| ||||| || ||||| | Sbjct 70919 GTGGTCAATTTATCTGAATGATAAGTATAGTATGGATGG-ACGTGATCCGAATGGATATG 70861 Query 189624 TAGGTT 189629 |||||| Sbjct 70860 TAGGTT 70855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923126429323920