Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq335 125 8e-24
seq158 120 3e-22
seq138 111 2e-19
seq413 105 8e-18
seq1 105 8e-18
seq236 89.7 6e-13
>seq335
Length=1594555
Score = 125 bits (138), Expect = 8e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||||||||||| ||||| ||||| || | || |||||| ||||||||||| ||||
Sbjct 905358 TCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGA 905299
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| || | || || |||||||| ||||| || || || ||||||||||| | ||
Sbjct 905298 AAGAGTACGTCCATCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGG 905239
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||| |||||| |||||| |||| | | | ||||| | ||| ||
Sbjct 905238 GATACCCTCTTTGTCCTGGATTTTGGCCTTGACATTTTCAATTGTGTCTGAAGCTTCGAC 905179
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| | |||||||| || || || | ||||| |||||||||||||||
Sbjct 905178 CTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCATT 905130
Score = 122 bits (134), Expect = 1e-22
Identities = 171/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||||||||||| ||||| ||||| || | || |||||| ||||||||||| ||||
Sbjct 905130 TCCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGA 905071
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| || | || |||| || |||||||| || || || |||||||| || | ||
Sbjct 905070 AAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGG 905011
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||| |||||| |||||| ||||| | | | ||||| | |||||
Sbjct 905010 AATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCAC 904951
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGCCGAA 43195
|| | |||||||||||||| || | || || |||||||| ||||| || | || |||
Sbjct 904950 TTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATCTTGAAGCTGAA 904891
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| | ||| | |||| ||| | ||| ||| |||||||| ||||| || |
Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906442
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| |||| | || || ||||| ||||| || || ||||| ||||||||||| | ||
Sbjct 906441 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906382
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| || ||||| ||| ||| |||| | |||| | | | |||||| | ||| ||
Sbjct 906381 ATGCCTTCCTTATCC-TGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGAC 906323
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| | || |||||||| || |||| || || ||||| || ||||||
Sbjct 906322 TTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||| | | |||||| |||| ||| | ||| ||| |||||||| ||||| || |
Sbjct 906730 TCCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA 906671
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| |||| | || || ||||| ||||| || || ||||| ||||||||||| | ||
Sbjct 906670 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906611
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134
| || ||||| ||| ||| |||| | |||| | | | |||||| | ||| |
Sbjct 906610 GATGCCTTCCTTATCC-TGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906552
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || | ||||||||||| || |||| || || || || || |||||
Sbjct 906551 CTTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| || ||||| |||||||||| ||||| | |||| || |||||||| ||||| ||
Sbjct 905549 TCTTTCTGAATGTTGTAATCAGAAAGAGTTCTTCCGTCTTCAAGCTGCTTGCCAGCAAAA 905490
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || ||||||||||| | || | | ||| |||||| |||||| |||| |
Sbjct 905489 ATCAGACGCTGCTGGTCTGGAGGGATACCCTCTTTGTCCTGGATTTTGGCCTTGACATTT 905430
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | || || | ||| || || | |||||||| || || || | ||||| |||
Sbjct 905429 TCAATTGTATCTGAAGCTTCGACCTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGACA 905370
Query 43173 AAGATTTGCATT 43184
||||||||||||
Sbjct 905369 AAGATTTGCATT 905358
>seq158
Length=288468
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| |||||||| ||||| || | ||| || |||||||||||||| || | |
Sbjct 89647 CCTCCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAC 89588
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || ||||||||||||||||| || | | ||||||||| | ||
Sbjct 89587 AGAGTACGTCCATCCTCGAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 89528
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| || ||| |||| | ||| | || | |||| || | | ||||| | || ||
Sbjct 89527 ATGCCCTCTTTGT-CTTGAATCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAAC 89469
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||| ||||| || | ||||| |||||||| |||||
Sbjct 89468 CTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTAACAAAGATCTGCAT 89421
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || | | ||| |||||||| | ||| ||| || ||||| |||||||| | |
Sbjct 90559 CCTCCCCTAAGTCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGAC 90500
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || || ||||| |||||||| || | | ||||||||| | ||
Sbjct 90499 AGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGG 90440
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| ||| ||| | || | ||||| | | | || ||| | || ||
Sbjct 90439 ATACCTTCCTTATCC-TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGAC 90381
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||||| || | ||||| || ||||| |||||
Sbjct 90380 TTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90333
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || | | ||| |||||||| | ||| ||| || ||||| |||||||| | |
Sbjct 91015 CCTCCCCTAAGTCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGAC 90956
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || || ||||| |||||||| || | | ||||||||| | ||
Sbjct 90955 AGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGG 90896
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| ||| ||| | || | ||||| | | | || ||| | || ||
Sbjct 90895 ATACCTTCCTTATCC-TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGAC 90837
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||||| || | ||||| || ||||| |||||
Sbjct 90836 TTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90789
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || | | ||| |||||||| | ||| ||| || ||||| |||||||| | |
Sbjct 91471 CCTCCCCTAAGTCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGAC 91412
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || || ||||| |||||||| || | | ||||||||| | ||
Sbjct 91411 AGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGG 91352
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| ||| ||| | || | ||||| | | | || ||| | || ||
Sbjct 91351 ATACCTTCCTTATCC-TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGAC 91293
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||||| || | ||||| || ||||| |||||
Sbjct 91292 TTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 91245
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||||||||| ||||| |||| || || || | || || || ||||||||||| ||
Sbjct 89839 TCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAA 89780
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| || | |||||| || | || | | || |||| | ||| |||| | |||| |
Sbjct 89779 ATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGT-CTTGAATTTTAGCCTTGACATT 89721
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||| || | ||| || || | || || |||||||| || |||||||| ||
Sbjct 89720 CTCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAAC 89661
Query 43172 AAAGATTTGCAT 43183
||| ||||||||
Sbjct 89660 AAAAATTTGCAT 89649
Score = 86.0 bits (94), Expect = 7e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
||||| |||| ||||| ||| || |||||||| || || || | || || || |
Sbjct 90091 CGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCA 90032
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| |||| || || |||||||| || | | ||||||||| | || | | ||| |||
Sbjct 90031 TCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCTTTG 89972
Query 43089 TCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| ||| |||| | || | | | | ||||||| | || || || | |||||
Sbjct 89971 TCC-TGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCGACTTCAAGTGTGAT 89913
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||| ||||| || ||||| || ||||| |||||
Sbjct 89912 GGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89877
Score = 86.0 bits (94), Expect = 7e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || |||||||| || | |||||| || | || || |||||||| ||||||||
Sbjct 90752 CTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAA 90693
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | ||||||||||| | || | | |||||||| ||| || || | |
Sbjct 90692 AATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTT 90633
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||||| | ||| || |||| || || || || || || || ||||||||
Sbjct 90632 CTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTAC 90573
Query 43172 AAAGATTTGCAT 43183
|||||||||||
Sbjct 90572 GAAGATTTGCAT 90561
Score = 86.0 bits (94), Expect = 7e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || |||||||| || | |||||| || | || || |||||||| ||||||||
Sbjct 91208 CTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAA 91149
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | ||||||||||| | || | | |||||||| ||| || || | |
Sbjct 91148 AATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTT 91089
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||||| | ||| || |||| || || || || || || || ||||||||
Sbjct 91088 CTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTAC 91029
Query 43172 AAAGATTTGCAT 43183
|||||||||||
Sbjct 91028 GAAGATTTGCAT 91017
Score = 86.0 bits (94), Expect = 7e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || |||||||| || | |||||| || | || || |||||||| ||||||||
Sbjct 91664 CTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAA 91605
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | ||||||||||| | || | | |||||||| ||| || || | |
Sbjct 91604 AATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTT 91545
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||||| | ||| || |||| || || || || || || || ||||||||
Sbjct 91544 CTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTAC 91485
Query 43172 AAAGATTTGCAT 43183
|||||||||||
Sbjct 91484 GAAGATTTGCAT 91473
Score = 84.2 bits (92), Expect = 3e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| | ||| | |||| ||| | || || ||||||||||| || || | |
Sbjct 89419 CCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCGGAC 89360
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || |||||||| |||||||| || | | ||||||||| | ||
Sbjct 89359 AGAGTACGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 89300
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || || || || ||| || |||| || | | |||||| | || ||
Sbjct 89299 ATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAACC 89240
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187
|||| |||||||| || || || || || || || || || ||||| |||
Sbjct 89239 TCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATGTTT 89189
>seq138
Length=30297376
Score = 111 bits (122), Expect = 2e-19
Identities = 73/81 (90%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 23152987 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 23152928
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||||||
Sbjct 23152927 TGACCACTATACTACCGAGGA 23152907
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||||| |||| | || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 27468370 AAAAATAATCTCTCCAGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 27468311
Query 60117 TCACCACTATACTACCGAGGA 60137
| ||||||||||||| || ||
Sbjct 27468310 TGACCACTATACTACTGAAGA 27468290
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
|||| | || ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1532513 TCTCTCCAGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1532572
Query 60125 ATACTACCGAGGATT 60139
||||||| || ||||
Sbjct 1532573 ATACTACTGAAGATT 1532587
>seq413
Length=1723044
Score = 105 bits (116), Expect = 8e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1707051 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1707110
Query 60126 TACTACCGAGGAT 60138
|||||||||||||
Sbjct 1707111 TACTACCGAGGAT 1707123
>seq1
Length=33571687
Score = 105 bits (116), Expect = 8e-18
Identities = 77/87 (89%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|||||| || ||| |||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct 12182200 AAAAATAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 12182259
Query 60116 CTCACCACTATACTACCGAGGA-TTGA 60141
|| ||||||||||||||||||| ||||
Sbjct 12182260 CTGACCACTATACTACCGAGGACTTGA 12182286
Score = 96.9 bits (106), Expect = 4e-15
Identities = 71/82 (87%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||||| ||||| || ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 5463606 AAAAATTCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 5463549
Query 60117 TCACCACTATACTACCGAGGAT 60138
| ||||||||||||| || |||
Sbjct 5463548 TGACCACTATACTACTGAAGAT 5463527
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
|||| | || ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 5454171 TCTCTCCAGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 5454112
Query 60125 ATACTACCGAGGAT 60138
||||||| || |||
Sbjct 5454111 ATACTACTGAAGAT 5454098
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
|||| | || ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 5454424 TCTCTCCAGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 5454365
Query 60125 ATACTACCGAGGAT 60138
||||||| || |||
Sbjct 5454364 ATACTACTGAAGAT 5454351
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
|||| | || ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 5454567 TCTCTCCAGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 5454508
Query 60125 ATACTACCGAGGAT 60138
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Sbjct 5454507 ATACTACTGAAGAT 5454494
>seq236
Length=27037145
Score = 89.7 bits (98), Expect = 6e-13
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
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Sbjct 1651472 AAAAAATCTCTCCA--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1651529
Query 60117 TCACCACTATACTACCGAGGA 60137
| ||||||||||||| || ||
Sbjct 1651530 TGACCACTATACTACTGAAGA 1651550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571774013203440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |