Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq158 102 5e-17 seq335 91.5 1e-13 >seq158 Length=288468 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 |||| ||| | ||| |||||||| || ||||||||||| ||| ||| | || ||| Sbjct 91909 ACCAAGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCGGAGAGCGTACGACCATCTTCC 91850 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGC 34299 || || || || || || || | ||||||||||| | |||| | | ||| ||||| Sbjct 91849 AATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGCGGG-ATTCCCTCTTTGTCCTG 91791 Query 34300 TATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359 || || ||| | || | |||| ||| | | ||||| || | ||||||||||| Sbjct 91790 GATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGACTTCAAGTGTGATGGTTTT 91731 Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||| | ||| ||||| ||||||||||| Sbjct 91730 GCCGGTCAAAGTCTTCACGAAGATCTGCAT 91701 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| |||||||| |||||||| |||| | || || | ||||| || |||||| Sbjct 90523 TCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAA 90464 Query 34259 ATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 || | || ||||||||| || || || || ||||| || ||||| ||||| | Sbjct 90463 ATCAACCTCTGCTGGTCTGGAGGGATAC-CT-TCCTTATCCTGAATCTTG-GCTTTGACG 90407 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | || | ||||| | ||||| || | ||||||||||||||||| | || || Sbjct 90406 TTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTG 90347 Query 34376 ACAAAGATCTGCAT 34389 || ||||||||||| Sbjct 90346 ACGAAGATCTGCAT 90333 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| |||||||| |||||||| |||| | || || | ||||| || |||||| Sbjct 90979 TCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAA 90920 Query 34259 ATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 || | || ||||||||| || || || || ||||| || ||||| ||||| | Sbjct 90919 ATCAACCTCTGCTGGTCTGGAGGGATAC-CT-TCCTTATCCTGAATCTTG-GCTTTGACG 90863 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | || | ||||| | ||||| || | ||||||||||||||||| | || || Sbjct 90862 TTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTG 90803 Query 34376 ACAAAGATCTGCAT 34389 || ||||||||||| Sbjct 90802 ACGAAGATCTGCAT 90789 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| |||||||| |||||||| |||| | || || | ||||| || |||||| Sbjct 91435 TCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAA 91376 Query 34259 ATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 || | || ||||||||| || || || || ||||| || ||||| ||||| | Sbjct 91375 ATCAACCTCTGCTGGTCTGGAGGGATAC-CT-TCCTTATCCTGAATCTTG-GCTTTGACG 91319 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | || | ||||| | ||||| || | ||||||||||||||||| | || || Sbjct 91318 TTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTG 91259 Query 34376 ACAAAGATCTGCAT 34389 || ||||||||||| Sbjct 91258 ACGAAGATCTGCAT 91245 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 |||| ||| | ||| |||||| || || |||||||||||||| ||| | || || Sbjct 89629 ACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCCTCG 89570 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 | |||||| || ||||| || | || ||||||||| ||| | || ||| ||||| Sbjct 89569 AGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCTTGA 89510 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 ||||| ||| | || | || | || | | || || || | |||||||| ||| Sbjct 89509 ATCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAACCTCAAGGGTGATGGTCTTG 89450 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| | || || |||||||||||||| Sbjct 89449 CCGGTCAAGGTCTTAACAAAGATCTGCAT 89421 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || ||||| || | |||| |||||||| || |||||||||||| Sbjct 91699 CCGCCACGAAGTCGTAGTACCAGATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGAC 91640 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||| || |||||||| | ||||||||||| ||| Sbjct 91639 AGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGA 91580 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||||| | | || | || | | ||| || Sbjct 91579 ATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACT 91520 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || || || || || ||||| || || ||||| ||||| Sbjct 91519 TCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCAT 91473 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || ||||| || | ||| |||||| || || || ||||||||||| ||| | || Sbjct 89404 AGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCGGACAGAGTACGTCCATCC 89345 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || | || ||||||||| ||| | || || || || Sbjct 89344 TCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCTTTATCT 89285 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | |||| | || || || | |||||||| Sbjct 89284 TGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAACCTCGAGGGTGATGGTC 89225 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || |||||||| || |||||||| Sbjct 89224 TTCCCAGTCAGGGTTTTCACGAAAATCTGCAT 89193 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | |||| |||||||| || |||||||||||||| ||| | || Sbjct 90772 AGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCT 90713 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| | ||||||||||| ||| | | |||||||| Sbjct 90712 TCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCT 90653 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||||| | | || | || | | ||| || || | || || || Sbjct 90652 TGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTC 90593 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || ||||| || || ||||| ||||| Sbjct 90592 TTACCAGTCAGAGTCTTTACGAAGATTTGCAT 90561 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | |||| |||||||| || |||||||||||||| ||| | || Sbjct 91228 AGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCT 91169 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| | ||||||||||| ||| | | |||||||| Sbjct 91168 TCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCT 91109 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||||| | | || | || | | ||| || || | || || || Sbjct 91108 TGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTC 91049 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || ||||| || || ||||| ||||| Sbjct 91048 TTACCAGTCAGAGTCTTTACGAAGATTTGCAT 91017 >seq335 Length=1594555 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| |||||||| || || || | |||| || | ||||||||| || || Sbjct 905550 TTCTTTCTGAATGTTGTAATCAGAAAGAGTTCTTCCGTCTTCAAGCTGCTTGCCAGCAAA 905491 Query 34258 AATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTA 34313 ||| || ||||||||||| || || || |||| ||||| || ||||| ||| | Sbjct 905490 AATCAGACGCTGCTGGTCTGGAGGGATACCCTCT--TTGTC--CTGGATTTTGGCCTTGA 905435 Query 34314 GATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTT 34373 || | || | ||| | | |||||| |||| |||||||| || || || | ||| | Sbjct 905434 CATTTTCAATTGTATCTGAAGCTTCGACCTCCAAGGTGATGGTCTTTCCAGTCAAAGTCT 905375 Query 34374 TCACAAAGATCTGCAT 34389 | |||||||| ||||| Sbjct 905374 TGACAAAGATTTGCAT 905359 Score = 87.8 bits (96), Expect = 1e-12 Identities = 152/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||| ||| | ||| || ||||| || |||||||| || || ||| | || Sbjct 905343 CAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGTCCATC 905284 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTG 34294 || | ||||||||| || ||||| || ||||||||||| || || || |||| ||| Sbjct 905283 TTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGGATACCCTCT--TTG 905226 Query 34295 TCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGA 34352 || || ||||| ||| | || | || | || | | |||||| |||| |||| Sbjct 905225 TC--CTGGATTTTGGCCTTGACATTTTCAATTGTGTCTGAAGCTTCGACCTCCAAGGTGA 905168 Query 34353 TGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || | ||| || |||||||| ||||| Sbjct 905167 TGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 905131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323047989490880