Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq236 127 2e-24 >seq236 Length=27037145 Score = 127 bits (140), Expect = 2e-24 Identities = 189/266 (71%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 20301 AGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAG 20360 |||||| || || || || |||| ||||| ||| |||| || || | ||| || | Sbjct 26890959 AGGAGTCGACCAGTTGCAGGATGTGATTAACAAAATAAAAAACAAACCGGATGACCGACG 26891018 Query 20361 AATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCA 20420 ||| || | ||||||||||| | |||| | ||| |||||||| | ||||| |||| Sbjct 26891019 AATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTATAATGGCTCTTCCTCCTTGTC- 26891077 Query 20421 TATGCTATG--CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGA 20478 ||||| || ||||||| || ||| || || || || ||||| |||||||| || Sbjct 26891078 -ATGCTCTGGTGCAATTTTGTGTAGCTGATGGAGAGTTATCTTGTCAGCTGTATCAAAGA 26891136 Query 20479 TCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTAT 20538 |||||||||||||| || || || ||||| ||||| |||| | |||| || | Sbjct 26891137 AGTGCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTTATTCTTTGCTCACATGC 26891196 Query 20539 ATGATTGCACATGTTACAGATTTAAA 20564 |||||||| ||| | || |||| || Sbjct 26891197 ATGATTGCCCATATAACGAATTTGAA 26891222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399154332894610