Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq335 105 5e-18
seq158 98.7 8e-16
seq796 82.4 6e-11
>seq335
Length=1594555
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| | || | |||||||| || || || || |||||||||||||||||||| |
Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906442
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | | ||| |||| ||||| || ||| |||| || | || || || ||
Sbjct 906441 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906382
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| |||||||||||| ||||| |||||| | | | | |||||| | ||| |
Sbjct 906381 ATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGACT 906322
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
|| | ||| ||| |||| || || || ||||| |||||||| ||||||
Sbjct 906321 TCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | | |||| ||||| || || |||||||||||||||||||| |
Sbjct 906730 TCCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA 906671
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| || | | ||| |||| ||||| || ||| |||| || | || || || ||
Sbjct 906670 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906611
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||||||| ||||| |||||| | | | | |||||| | ||
Sbjct 906610 GATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906551
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | ||||||| |||| ||||| || ||||| || ||||| |||||
Sbjct 906550 TTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503
Score = 95.1 bits (104), Expect = 9e-15
Identities = 164/232 (71%), Gaps = 5/232 (2%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGA-ATGTTGTAGTCGG 18156
||| || || || | ||| || | || ||||||||||||||||| |||||||| || |
Sbjct 906045 TCCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATCAG 905986
Query 18157 CCATTGTTT-TACAATC-TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCAC 18214
|| |||| | | ||| ||||| |||||| || ||| | || || | |||||| ||
Sbjct 905985 ACAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGG 905926
Query 18215 GGGCACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCT 18273
|| | |||||| || || ||| | | |||| ||| | | | | ||| ||| | ||
Sbjct 905925 AGGGATGCCTTCTTTGTCTTGAATCT-TGGCTTTGACATTTTCGATAGTATCAGAAGCCT 905867
Query 18274 CGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| ||| | || ||| | || || ||||| ||||| ||||||||||||||
Sbjct 905866 CTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815
>seq158
Length=288468
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || |||| |||||| | ||||||||| ||||| ||||||||||||||||| | |
Sbjct 89875 CCACCGCGAAGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGAC 89816
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| | |||||| | ||| || || ||| | || || || || ||||| ||
Sbjct 89815 AATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGA 89756
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| ||||| || || ||||| |||||| | ||| || ||| | ||| |
Sbjct 89755 ATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTCTCAATCGTATCAGAAGCTTCGACT 89696
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | || || ||||||| || | || || ||||||||||||||
Sbjct 89695 TCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTGCAT 89649
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| || |||| |||||||| ||| || || || ||||| ||||||||||| |||| |
Sbjct 90331 CCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCGGAC 90272
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| | ||| || | ||| || || ||| |||| | | || ||||| |||
Sbjct 90271 AAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGGGGA 90212
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| |||||||| || || | ||| || | | ||| ||||| || || |
Sbjct 90211 ATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCAACT 90152
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| ||| ||| | || || ||||| || ||||| || ||||||||
Sbjct 90151 TCAAGGGTAATGGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 90105
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||||||||| |||||||||||||| |||||||||| || || | ||| ||
Sbjct 89629 ACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCCTCG 89570
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| || || || || |||| | || || || || ||| | ||| || || || |
Sbjct 89569 AGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCTTGA 89510
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | ||| |||| ||||||| | |||
Sbjct 89509 ATCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAACCTCAAGGGTGATGGTCTTG 89450
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||| || || ||||| || |||||
Sbjct 89449 CCGGTCAAGGTCTTAACAAAGATCTGCAT 89421
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTC-TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156
||| |||| || | |||| |||| ||| || || || ||||| || || ||||||||||
Sbjct 91928 TCCACCCCTAAGACGTAAG-ACCAAGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCGG 91870
Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216
| || || ||||||||||||||| || ||| |||| | | || || || |
Sbjct 91869 AGAGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGCG 91810
Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| | || || || || |||| |||||| | | | | || ||| || ||||
Sbjct 91809 GGATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGA 91750
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| |||||| ||||||||||||| || || || || || |||||
Sbjct 91749 CTTCAAGTGTGATGGTTTTGCCGGTCAAAGTCTTCACGAAGATCTGCAT 91701
>seq796
Length=23603
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195
|||| || |||||||| |||| || |||| || ||| || || |||||||| ||| | |
Sbjct 4665 CTTTCTGTATGTTGTAATCGGACAATGTTCGACCATCCTCTAACTGTTTGCCAGCAAAAA 4724
Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGT 18254
| | || |||||||| || | ||||||||||| |||| | || || || | |
Sbjct 4725 TCAATCGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTT-TAGCTTTAACATTT 4783
Query 18255 GCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACA 18314
| | ||| || | ||| || | || ||| | ||||| ||||| ||||| |||
Sbjct 4784 TCTATAGTATCTGAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGACA 4843
Query 18315 AAAATTTGCATT 18326
||||||||||||
Sbjct 4844 AAAATTTGCATT 4855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379315807391010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |