Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq335 105 5e-18 seq158 98.7 8e-16 seq796 82.4 6e-11 >seq335 Length=1594555 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | || | |||||||| || || || || |||||||||||||||||||| | Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906442 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | ||| |||| ||||| || ||| |||| || | || || || || Sbjct 906441 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906382 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||||||| ||||| |||||| | | | | |||||| | ||| | Sbjct 906381 ATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGACT 906322 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| |||| || || || ||||| |||||||| |||||| Sbjct 906321 TCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| || || | | |||| ||||| || || |||||||||||||||||||| | Sbjct 906730 TCCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA 906671 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | | ||| |||| ||||| || ||| |||| || | || || || || Sbjct 906670 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906611 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||||||||| ||||| |||||| | | | | |||||| | || Sbjct 906610 GATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906551 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||||| |||| ||||| || ||||| || ||||| ||||| Sbjct 906550 TTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503 Score = 95.1 bits (104), Expect = 9e-15 Identities = 164/232 (71%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGA-ATGTTGTAGTCGG 18156 ||| || || || | ||| || | || ||||||||||||||||| |||||||| || | Sbjct 906045 TCCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATCAG 905986 Query 18157 CCATTGTTT-TACAATC-TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCAC 18214 || |||| | | ||| ||||| |||||| || ||| | || || | |||||| || Sbjct 905985 ACAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGG 905926 Query 18215 GGGCACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCT 18273 || | |||||| || || ||| | | |||| ||| | | | | ||| ||| | || Sbjct 905925 AGGGATGCCTTCTTTGTCTTGAATCT-TGGCTTTGACATTTTCGATAGTATCAGAAGCCT 905867 Query 18274 CGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||| | || ||| | || || ||||| ||||| |||||||||||||| Sbjct 905866 CTACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815 >seq158 Length=288468 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| |||||| | ||||||||| ||||| ||||||||||||||||| | | Sbjct 89875 CCACCGCGAAGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGAC 89816 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | |||||| | ||| || || ||| | || || || || ||||| || Sbjct 89815 AATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGA 89756 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| || || ||||| |||||| | ||| || ||| | ||| | Sbjct 89755 ATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTCTCAATCGTATCAGAAGCTTCGACT 89696 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || ||||||| || | || || |||||||||||||| Sbjct 89695 TCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTGCAT 89649 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || |||| |||||||| ||| || || || ||||| ||||||||||| |||| | Sbjct 90331 CCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCGGAC 90272 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | ||| || | ||| || || ||| |||| | | || ||||| ||| Sbjct 90271 AAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGGGGA 90212 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||| || || | ||| || | | ||| ||||| || || | Sbjct 90211 ATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCAACT 90152 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||| ||| | || || ||||| || ||||| || |||||||| Sbjct 90151 TCAAGGGTAATGGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 90105 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||||||||| |||||||||||||| |||||||||| || || | ||| || Sbjct 89629 ACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGACAGAGTACGTCCATCCTCG 89570 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | || || || || |||| | || || || || ||| | ||| || || || | Sbjct 89569 AGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCTTGA 89510 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | ||| |||| ||||||| | ||| Sbjct 89509 ATCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAACCTCAAGGGTGATGGTCTTG 89450 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| || || ||||| || ||||| Sbjct 89449 CCGGTCAAGGTCTTAACAAAGATCTGCAT 89421 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTC-TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156 ||| |||| || | |||| |||| ||| || || || ||||| || || |||||||||| Sbjct 91928 TCCACCCCTAAGACGTAAG-ACCAAGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCGG 91870 Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216 | || || ||||||||||||||| || ||| |||| | | || || || | Sbjct 91869 AGAGCGTACGACCATCTTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGCG 91810 Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | | || || || || |||| |||||| | | | | || ||| || |||| Sbjct 91809 GGATTCCCTCTTTGTCCTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGA 91750 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| |||||| ||||||||||||| || || || || || ||||| Sbjct 91749 CTTCAAGTGTGATGGTTTTGCCGGTCAAAGTCTTCACGAAGATCTGCAT 91701 >seq796 Length=23603 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195 |||| || |||||||| |||| || |||| || ||| || || |||||||| ||| | | Sbjct 4665 CTTTCTGTATGTTGTAATCGGACAATGTTCGACCATCCTCTAACTGTTTGCCAGCAAAAA 4724 Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGT 18254 | | || |||||||| || | ||||||||||| |||| | || || || | | Sbjct 4725 TCAATCGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTT-TAGCTTTAACATTT 4783 Query 18255 GCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACA 18314 | | ||| || | ||| || | || ||| | ||||| ||||| ||||| ||| Sbjct 4784 TCTATAGTATCTGAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGACA 4843 Query 18315 AAAATTTGCATT 18326 |||||||||||| Sbjct 4844 AAAATTTGCATT 4855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379315807391010