Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq335 118 9e-22 seq158 86.0 5e-12 >seq335 Length=1594555 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890 ||||||||| || || |||||||||||||| ||||| || ||| | || || ||| | Sbjct 906502 CATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTC 906561 Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950 ||||| | | |||| || |||| |||||| | || |||||| | || ||||| Sbjct 906562 CGACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906621 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 ||| ||| | || | ||| || ||||| ||||| ||| | ||| | || |||| Sbjct 906622 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906681 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 ||| || |||||| ||||||||||| | || || || | |||||||| Sbjct 906682 CATTCAAAAAGAGTCCACGCTTCATCTGGTCTTGCGTCTTCGCGGAGG 906729 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| ||||||||||| || ||||| |||||| | || |||||| | | Sbjct 906275 ATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTCC 906334 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| || |||| |||||| | || |||||| | || |||||| Sbjct 906335 GACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCAG 906394 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | || | ||| || ||||| ||||| ||| | ||| | || |||| | Sbjct 906395 CAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAAC 906454 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || || |||||| ||||||| ||| | || | || || | ||||| Sbjct 906455 ATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGG 906501 >seq158 Length=288468 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || ||||| ||||||||||| || || | || ||||| | | Sbjct 90333 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90392 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| || || | || ||| | || ||||| | || |||||| Sbjct 90393 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90452 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | || || | || || || ||||| |||||| | ||| || |||||||| | Sbjct 90453 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90512 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTT 25043 || ||||||||| |||| |||||||| || || Sbjct 90513 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTT 90544 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || ||||| ||||||||||| || || | || ||||| | | Sbjct 90789 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90848 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| || || | || ||| | || ||||| | || |||||| Sbjct 90849 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90908 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | || || | || || || ||||| |||||| | ||| || |||||||| | Sbjct 90909 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90968 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTT 25043 || ||||||||| |||| |||||||| || || Sbjct 90969 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTT 91000 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || ||||| ||||||||||| || || | || ||||| | | Sbjct 91245 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 91304 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| || || | || ||| | || ||||| | || |||||| Sbjct 91305 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 91364 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | || || | || || || ||||| |||||| | ||| || |||||||| | Sbjct 91365 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 91424 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTT 25043 || ||||||||| |||| |||||||| || || Sbjct 91425 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTT 91456 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || || || ||||||||||| || || | || ||||| | Sbjct 91701 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91760 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| ||| |||| ||||| | ||||| || | ||| |||||| Sbjct 91761 GATACGATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCGCCAGACCAG 91820 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || |||||||| | ||| || |||||| |||||||| || | ||| |||| Sbjct 91821 CAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCTCCGACTACAAT 91880 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACG 25046 || ||||||||| | || || || || || ||||| Sbjct 91881 ATCCAGAAAGAGTCGACTCTCCACTTGGTCTTACG 91915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418272911908160