Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq236 104 5e-17
seq410 98.7 2e-15
>seq236
Length=27037145
Score = 104 bits (114), Expect = 5e-17
Identities = 184/263 (70%), Gaps = 4/263 (2%)
Strand=Plus/Plus
Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACT-CTCGTGG 35281
|||| | || || |||||||| || | ||| | | || || || || | ||| |||
Sbjct 26890631 TTCCTCTGCTGACAACCAAGAACGTTCTTTGGCGTGCTGTGGTCGAGGAGTTGCTC-TGG 26890689
Query 35282 TTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAAC 35341
||||| | ||| || |||| ||||| | ||| | || || | |||||||||
Sbjct 26890690 TTCATAAAGGGATCCACTAACGCAAAAGAGCTTGCCGACAAAGGCGTAAAAATCTGGAAC 26890749
Query 35342 GCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGAT 35401
|| ||| | ||||| ||||||||||| | ||||| |||||||| |||||| ||
Sbjct 26890750 GCCAATAGTTCGCGTGAATTTTTGGATTCCTGCGGGTTCACCGATAGAGAAGAGGGCGAC 26890809
Query 35402 TTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTC- 35460
||||| || ||||| || ||||| ||| | ||||| || || |||||| | | | |
Sbjct 26890810 TTGGGCCCTGTATATGGCTTCCAGTGGAGGCATTTCGGAGCCAAATATG-TCAATATGCA 26890868
Query 35461 TTCCGATTATACTGGAAAGGGTA 35483
| | ||||| |||||| ||||||
Sbjct 26890869 TACGGATTACACTGGACAGGGTA 26890891
Score = 86.0 bits (94), Expect = 1e-11
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 35522 AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATG 35581
|| || ||||| || | || || ||| || |||||||| | ||| ||| | |||
Sbjct 26891002 AAACCGGATGACCGACGAATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTATAATG 26891061
Query 35582 GCTCTTCCTCCATGCCACATG-ACTGCT-CAATTTTATGTGGCTAATGGAGAATTGTCGT 35639
||||||||||| || |||| ||| | ||||||| ||| ||| ||||||| || || |
Sbjct 26891062 GCTCTTCCTCCTTG--TCATGCTCTGGTGCAATTTTGTGTAGCTGATGGAGAGTTATCTT 26891119
Query 35640 GCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCAT 35699
| ||| ||||||| |||| | ||| | || | || || || ||||| ||||| || |
Sbjct 26891120 GTCAGCTGTATCAAAGAAGTGCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTT 26891179
Query 35700 ACTCTCTTCTGAC 35712
| ||| | || ||
Sbjct 26891180 ATTCTTTGCTCAC 26891192
>seq410
Length=4553683
Score = 98.7 bits (108), Expect = 2e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962
|| || |||| | | ||||||| |||||||| || |||||||| || || || ||
Sbjct 2616142 TTTGCCGAACGAGTGATTGCCTTCGCTGCAGTCGAGGGAATCTTTTTCAGCGGCAGTTTT 2616201
Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022
|| ||||||||||| | ||||| | ||| || ||||||| || |||| | ||||||
Sbjct 2616202 GCTGCCATTTTCTGGCTGAAGAAGCGTGGTCTTATGCCTGGACTTACCTTCAGCAATGAA 2616261
Query 102023 TTCATTTCTAGGGACGA 102039
||||||||||||||||
Sbjct 2616262 CTCATTTCTAGGGACGA 2616278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989506683183590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |