Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq236 104 5e-17 seq410 98.7 2e-15 >seq236 Length=27037145 Score = 104 bits (114), Expect = 5e-17 Identities = 184/263 (70%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACT-CTCGTGG 35281 |||| | || || |||||||| || | ||| | | || || || || | ||| ||| Sbjct 26890631 TTCCTCTGCTGACAACCAAGAACGTTCTTTGGCGTGCTGTGGTCGAGGAGTTGCTC-TGG 26890689 Query 35282 TTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAAC 35341 ||||| | ||| || |||| ||||| | ||| | || || | ||||||||| Sbjct 26890690 TTCATAAAGGGATCCACTAACGCAAAAGAGCTTGCCGACAAAGGCGTAAAAATCTGGAAC 26890749 Query 35342 GCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGAT 35401 || ||| | ||||| ||||||||||| | ||||| |||||||| |||||| || Sbjct 26890750 GCCAATAGTTCGCGTGAATTTTTGGATTCCTGCGGGTTCACCGATAGAGAAGAGGGCGAC 26890809 Query 35402 TTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTC- 35460 ||||| || ||||| || ||||| ||| | ||||| || || |||||| | | | | Sbjct 26890810 TTGGGCCCTGTATATGGCTTCCAGTGGAGGCATTTCGGAGCCAAATATG-TCAATATGCA 26890868 Query 35461 TTCCGATTATACTGGAAAGGGTA 35483 | | ||||| |||||| |||||| Sbjct 26890869 TACGGATTACACTGGACAGGGTA 26890891 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 35522 AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATG 35581 || || ||||| || | || || ||| || |||||||| | ||| ||| | ||| Sbjct 26891002 AAACCGGATGACCGACGAATAATAATGTGCGCCTGGAATCCAGTAGATATTCCTATAATG 26891061 Query 35582 GCTCTTCCTCCATGCCACATG-ACTGCT-CAATTTTATGTGGCTAATGGAGAATTGTCGT 35639 ||||||||||| || |||| ||| | ||||||| ||| ||| ||||||| || || | Sbjct 26891062 GCTCTTCCTCCTTG--TCATGCTCTGGTGCAATTTTGTGTAGCTGATGGAGAGTTATCTT 26891119 Query 35640 GCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCAT 35699 | ||| ||||||| |||| | ||| | || | || || || ||||| ||||| || | Sbjct 26891120 GTCAGCTGTATCAAAGAAGTGCTGATATGGGACTTGGAGTCCCATTCAACATTGCCTCTT 26891179 Query 35700 ACTCTCTTCTGAC 35712 | ||| | || || Sbjct 26891180 ATTCTTTGCTCAC 26891192 >seq410 Length=4553683 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || || |||| | | ||||||| |||||||| || |||||||| || || || || Sbjct 2616142 TTTGCCGAACGAGTGATTGCCTTCGCTGCAGTCGAGGGAATCTTTTTCAGCGGCAGTTTT 2616201 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 || ||||||||||| | ||||| | ||| || ||||||| || |||| | |||||| Sbjct 2616202 GCTGCCATTTTCTGGCTGAAGAAGCGTGGTCTTATGCCTGGACTTACCTTCAGCAATGAA 2616261 Query 102023 TTCATTTCTAGGGACGA 102039 |||||||||||||||| Sbjct 2616262 CTCATTTCTAGGGACGA 2616278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989506683183590