Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1 188 9e-43
seq14 114 2e-20
seq410 100 4e-16
>seq1
Length=33571687
Score = 188 bits (208), Expect = 9e-43
Identities = 319/457 (70%), Gaps = 4/457 (1%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|| || || ||||||||||||| |||| ||||||||||| |||||||| || |
Sbjct 24628368 TCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 24628427
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307
|||| | ||| || |||| ||||| || | || || ||||| | ||| ||| ||
Sbjct 24628428 CACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 24628486
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367
|| ||||| | ||| | ||| || || ||||| |||||||| |||||||| || | |
Sbjct 24628487 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 24628546
Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
|| |||| ||||||||||||||| || ||||| | ||||||| | |||||||| ||
Sbjct 24628547 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 24628606
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
||||| | ||| | || |||||||| || ||||| | ||| |||| | ||| || ||
Sbjct 24628607 TTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 24628666
Query 63488 TATACCATTGGTACCGGAGATATAGCCT-CCACTGGCACGAATATTACTAATTGATAGAC 63546
|| ||| || || || || || | | | ||| |||| | ||| | || | ||
Sbjct 24628667 TACACCGTTTGTGCCAGAAAT-TCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAAC 24628725
Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606
| || || || || ||| || ||| || |||| || | || ||||| || ||||
Sbjct 24628726 CAATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTT 24628785
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643
| || || || || |||| |||| || ||||| ||
Sbjct 24628786 CAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822
Score = 149 bits (164), Expect = 8e-31
Identities = 269/391 (69%), Gaps = 7/391 (2%)
Strand=Plus/Plus
Query 62160 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62219
||||| || | ||| | ||| ||| ||||| |||||||| || | || |||||||||
Sbjct 24627100 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 24627159
Query 62220 TTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 62279
|| | || |||||||| | ||| ||||| | ||||| || | | ||| | || ||
Sbjct 24627160 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCA 24627219
Query 62280 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCA 62336
|||| ||| | ||||||| || || | | | || || |||||| |||||
Sbjct 24627220 GGAATCCTTGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 24627279
Query 62337 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAAT 62396
|| | ||| | | || || || || || | | | ||| || || || || ||||||
Sbjct 24627280 TCGTCCCACAGATCCCTGTCTGTCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAAT 24627339
Query 62397 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62456
|||||||| | || | || |||||||| || || || || || || | ||| || ||
Sbjct 24627340 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 24627399
Query 62457 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62516
|| ||||||||||| || || || || || ||||| || || | || ||| ||| | |
Sbjct 24627400 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 24627459
Query 62517 AGACCGTATGTTCTG--ATTTTATCTTTTAG 62545
| ||| |||||||| |||||| |||| ||
Sbjct 24627460 ACACC--ATGTTCTGCAATTTTAGCTTTCAG 24627488
Score = 120 bits (132), Expect = 4e-22
Identities = 190/270 (70%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 63642 CTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63701
|| |||||||| ||||| ||| | || ||| | || || || ||||| |||||
Sbjct 24628894 CTCGACATTTGCTGACGTAAAGTACAAGCCGAAAAAAGCGTTGGCGATGCGTGGGTAAAA 24628953
Query 63702 CATTTTTCAGAAAG-TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63760
| ||||| | ||| ||||| ||||||||| || || | ||| || |||||
Sbjct 24628954 TAACGCTCAGACATATAG-TTGTAAGTCTCAATAACTTTCTCGAGATCATCTTTGTGAAT 24629012
Query 63761 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTT 63820
|||| || || | ||| | ||||||||| || | |||||| | || || || || ||
Sbjct 24629013 AGCTACAGCAACTCTCATGAGCATGTGCTGTGGACGTTCAACTACCTTTTTATTGATCTT 24629072
Query 63821 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63880
|| ||| || | |||||||||| ||||| ||||| || |||||| ||| |||| ||
Sbjct 24629073 CATCAAATAACTTCTTTCCAAAGTCTTAAATCCAAAGTAATTGTATCCAAAATCTCTATC 24629132
Query 63881 GTAAATAATAACCGAATTGAGCTTATCCTT 63910
|| || || | ||||| |||||||||||
Sbjct 24629133 ATAGATGATGGCAGAATTCAGCTTATCCTT 24629162
Score = 82.4 bits (90), Expect = 1e-10
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 64008 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATG 64067
|| |||| ||| || ||||| ||||||| ||| |||| ||||||||||| |||||||||
Sbjct 24629345 CTGAATACTTTCTTGGTTTCTTTGTGTAAATTGGATACTGCTATTCTGGCTGCTAGAATG 24629404
Query 64068 GCATAATCCG 64077
||||||||||
Sbjct 24629405 GCATAATCCG 24629414
>seq14
Length=421909
Score = 114 bits (126), Expect = 2e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 62325 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTA 62384
|| || || ||||||| ||| | ||||||| |||||| | | | | ||| || |||
Sbjct 277594 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277535
Query 62385 ACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 62444
|| | ||||||||| ||||| || | | ||||||||||||||| || || || |||
Sbjct 277534 ACAATAATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277475
Query 62445 ACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62497
|| || ||||| |||||||| || ||||| || || || || ||||| |||||
Sbjct 277474 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTTGGCATTGGTGC 277422
Score = 107 bits (118), Expect = 2e-18
Identities = 201/296 (68%), Gaps = 6/296 (2%)
Strand=Plus/Minus
Query 62835 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62894
||||||| ||| | ||| |||||||||| | ||| | ||| ||| || || ||
Sbjct 276917 GGATAATGATTCAGATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCT 276858
Query 62895 TTCAGTTTGAGAAAATCAAATCGCC------CATCTATTACAAACATGTTCAATGCAACA 62948
|||| ||| ||||||| | | || | |||||||| || | ||||
Sbjct 276857 TTCAATTTTAGAAAATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATG 276798
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008
||||| | ||||||||| ||||| || || | | | |||||||| || ||||||||
Sbjct 276797 GATGCTAAATTACACACTGCTACTTCGTTTGGAGAAGAGTATTGTATAATTTCAGTGCAT 276738
Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068
| |||||| | || |||||||| | |||||||||||| || || || |||
Sbjct 276737 AAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTTGATTTACGATTGCAGTGATCT 276678
Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63124
||||| || || | ||||| |||||||||| || | || || ||| || ||||
Sbjct 276677 TTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCTTTTAAAATGGCAGTCCA 276622
Score = 86.0 bits (94), Expect = 8e-12
Identities = 196/291 (67%), Gaps = 3/291 (1%)
Strand=Plus/Minus
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAG-GTAGGAGAAGCGTGCGT 63697
|| || |||||||| || | |||| | ||| ||| ||| |||||||| || || ||
Sbjct 275836 CACCTGGACATTTGTTGGTGTATAGTACATGCAAAAAAAAAGTGTAGGAGATGCATGTGT 275777
Query 63698 AAACCATTTTTCAGAAAGTAGA-TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63756
|| | ||||||| ||| | || || ||||| || || || | |||| || ||
Sbjct 275776 GAAGTAACGTTCAGAA-GTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTAT 275718
Query 63757 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTA 63816
||| ||||||| || | ||| | ||| | || |||| ||||| | || || |
Sbjct 275717 GAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGGTCGCTCAACCACTTGTCCATTAA 275658
Query 63817 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63876
| | || ||||| ||| ||||| |||||||| ||||||||||| | ||| ||||
Sbjct 275657 TCCTGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCTC 275598
Query 63877 GTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATAT 63927
|| || || | ||||| || |||| |||| ||| | || |||||
Sbjct 275597 TGTCATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTTTTGAATTATAT 275547
>seq410
Length=4553683
Score = 100 bits (110), Expect = 4e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 33873 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33932
|||||||| || ||||||||||||||||||| ||| || || ||||| || | ||||||
Sbjct 2615930 TACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAGCGAGCCTCA 2615871
Query 33933 GTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTG 33992
|| | ||||||||| | || || || | | ||| ||||| || || ||||| |
Sbjct 2615870 GTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCCGAG 2615811
Query 33993 GCTGCAAAAAACGCCAATACATG 34015
|| ||||| || ||||| |||||
Sbjct 2615810 GCAGCAAAGAATGCCAAAACATG 2615788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629769592153440
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