Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 167 2e-36 seq14 107 2e-18 >seq1 Length=33571687 Score = 167 bits (184), Expect = 2e-36 Identities = 327/478 (68%), Gaps = 4/478 (1%) Strand=Plus/Plus Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977 || || | ||| |||||||| | ||| || | ||||| ||||| |||||| |||||| Sbjct 24628347 TCATACTTTATGTATAATTTATCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACAT 24628406 Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037 || ||||||||||| | ||| | | || | || | | ||| || || || Sbjct 24628407 TCATGTGGACACATTAAACTCCACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCC 24628466 Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTT 38097 || | |||||| ||| || | ||| | | ||| | |||||| || ||| |||||| Sbjct 24628467 GGGATCCATAAAGCATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTT 24628526 Query 38098 CTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGC 38156 || || | ||||| ||||| || ||||| ||||| ||||| | ||| || | | || Sbjct 24628527 -TTGAGATCGAGAAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGC 24628585 Query 38157 TCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAA 38216 ||| ||||| || | || || |||| | || | | |||||||| |||| ||| | Sbjct 24628586 TCCAGGTCTCTTGTTTCCACCTTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAAT 24628645 Query 38217 CATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCG 38276 |||||| |||| |||||||||| |||||| | || || || |||||| | |||| Sbjct 24628646 CATAGGAACTAAACCATTAGATACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCT 24628705 Query 38277 TATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGAT-ATTAAAGCGCATTGTT 38335 |||| | | ||| || || ||||| ||| | |||| | | |||||| ||| | Sbjct 24628706 TATAGTGTGAACACTCAAACCAATGCCACCAGCA-GATTTGCTGACTAAAGCACATCTCT 24628764 Query 38336 TTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACT 38393 | | |||||| | || ||||| |||||||| || | |||| || | |||||||| Sbjct 24628765 TCAGTGTATCATAAATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822 Score = 120 bits (132), Expect = 3e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 37401 TTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTAT 37460 |||||||| ||||||||||| ||||| || ||||||| | || ||||||||||| | Sbjct 24627669 TTTAGCTATTTCGCAACTAGCTTCTAAAGCACCATAATACAAAGTCTCGAAAATTTGGGT 24627728 Query 37461 ATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGC 37520 || | || || || ||||| || || |||| ||||| || ||||| ||| ||||||| Sbjct 24627729 GTTCAGTAATTGAGCCTCTTCACTTTCAAATGGATAGCGCATTAATAAAAAGGCATCAGC 24627788 Query 37521 CAAACCCTGAACACCGATACCTAT 37544 ||||||||||| ||| || ||||| Sbjct 24627789 CAAACCCTGAATACCAATGCCTAT 24627812 >seq14 Length=421909 Score = 107 bits (118), Expect = 2e-18 Identities = 206/304 (68%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 37045 TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTA 37104 |||||||||||||| | | ||| || || || |||| || ||| | |||||| Sbjct 277624 TGAATAGAACCATTGTTGGCAATTATTTCGTTTTTCATTTCATCATCCCAAAGATTTCTC 277565 Query 37105 CTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTT 37164 || ||| || | |||| |||||||| |||| || ||||| || || || | | Sbjct 277564 TTTGTTAAATCATTTAATAAATGTGGATTAACAATAATGAATTCTCCTGACAAAACACGT 277505 Query 37165 CTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGAT 37224 || || || ||||| || || || || || | || ||||| || | ||||| |||| | Sbjct 277504 CTAGTGTAAATATTACTTGTGTAAGGCTCCACTGATTCATTGTTTCCCAATATCTGAGCT 277445 Query 37225 GTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATT 37284 ||||| || || ||||||||||| | || || ||| | | ||||| | ||| Sbjct 277444 GTAGAAGCTGTTGGCATTGGTGCAAGAAGTAGTGAATTACGAACTCCATACTTGGCTATT 277385 Query 37285 CTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATAT 37344 || ||||| | || ||||||||| || | ||||| || |||||||||||| Sbjct 277384 TTCAATTTTAATGCAGCCCAATCCCACAAGTTGGTTGGAGTCACATTCCACATATCATAC 277325 Query 37345 TGTA 37348 |||| Sbjct 277324 TGTA 277321 Score = 104 bits (114), Expect = 2e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977 || || | ||| || | ||| ||||| |||| ||||| ||||| ||| ||||||||| Sbjct 276477 TCTTACTTTATGTACAGTTTATTAAATTCATCTCCCCAAACATCAGGTAAGCCTGGACAT 276418 Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037 ||| ||||||||||| | ||||| |||| | ||| | || |||||||||||| Sbjct 276417 TCGTGTGGACACATTAAACTCCATTTCTCATTGTCAAGTACTCTTTGCATAAATAAATCT 276358 Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTA 38089 || | |||||| ||| ||| | || | | |||||||||||| || |||| Sbjct 276357 GGGATCCATAAGGCATAAAACAGTTCCCTTGCTCTATATTCTTCCTTACCTA 276306 Score = 102 bits (112), Expect = 8e-17 Identities = 217/319 (68%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 38083 TTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATA 38142 || || | ||| ||| |||| || || || || ||||| || ||||| || |||| | Sbjct 276230 TTACCAATATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGA 276171 Query 38143 TAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTA 38202 |||| | | ||| || || ||||| | || || |||| |||| | | ||||| || Sbjct 276170 TAAAGAGCAAATGCACCAGGCCTTTTGTTTCCACCTTGATCAATAAAGCGTACTGTATTG 276111 Query 38203 TTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAA 38262 || ||| ||| | ||||||||||| ||||| | || || | | | || | Sbjct 276110 TTGAATACTCTGATCATAGGTACTAATCCATTTGCAAATCCATTATTGCTAGCAATCGCA 276051 Query 38263 GTACCCTTAGCTCGTATATTACTTATCGACAAT-CCTATTCCACCTGCATGTTTTGATAT 38321 || || ||||||| |||||| | | | || || || |||||||| | |||| || Sbjct 276050 GTTCCTTTAGCTCTAATATTA-TGAACACTTATACCAATACCACCTGC-GGATTTGCTAA 275993 Query 38322 TAA-AGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380 ||| || ||| ||||| || || || || ||||||||||| || || | || | | Sbjct 275992 TAATTGCACATCTCTTTAATGTTTCGAAAATTCCTTCTATACTATCTTCAATCATGGTAA 275933 Query 38381 GTATAAAACAACTAGACAT 38399 | |||||||||||| |||| Sbjct 275932 GAATAAAACAACTAAACAT 275914 Score = 102 bits (112), Expect = 8e-17 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383 |||| ||||||| ||||| || | ||||| || |||| ||| | || || | Sbjct 277255 TTCTAGAACCACAAATCAT--TGACTTACTCCTTTGCTTACTGGTGAACCATTGTAGGAA 277198 Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443 ||| ||||| | ||| || | ||| ||||||| ||||| || || |||||| | Sbjct 277197 GAATATGGTCCATTTTCTTTGGCCAATTCACAACTAGCTTCTAAAGCTCCAAAATATAAT 277138 Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503 |||||||||||||| ||||||| | || |||| || ||||||| ||||| || | Sbjct 277137 GTTTCGAAAATTTGAATATTTAGCTGCTGAGCCTCTTTACTCTCGAATGGATAGCGCATT 277078 Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTA 37543 || | ||| | || ||||| || || || |||||||||| Sbjct 277077 AACAAAAAAGCGTCTGCCAATCCTTGTACCCCGATACCTA 277038 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/159 (74%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 36863 TCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATAT--ATAT 36920 |||| || ||||||||||| || |||||| | |||||| ||| | |||| | || Sbjct 277885 TCCAGCCATAAAAATGCATGGAAGTAAGTTTTTCAGTTGTAGGCTTAGCCATATGAACAT 277826 Query 36921 TGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACA 36980 | || ||||| ||| || ||||| || |||| || || ||||||| ||||||| Sbjct 277825 TTACA--GATTGTGATTGGTCAATAAAAGCGCCTCGATCTGCAGCCATTTTTAAAATAAT 277768 Query 36981 TTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTT 37019 ||| |||| ||||||||| || |||||||||| || ||| Sbjct 277767 TTTCTGAGGTATCTCCCATACTGTTTTATATAATTCTTT 277729 Score = 84.2 bits (92), Expect = 2e-11 Identities = 169/247 (68%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 38424 AAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTAT 38483 ||| | |||||||||||||||| |||| | ||| || |||||||||||| ||||| Sbjct 275800 AAAAAGTGTAGGAGATGCATGTGTGAAGTAACGTTCAGAAGTATAATTATATGTCTCTAT 275741 Query 38484 TACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543 || | || | ||| | |||| | ||| | || ||||| ||||||| |||||| Sbjct 275740 GACTTTTTCAAGATCCTCTTTATGAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGG 275681 Query 38544 TCTTTCTATTATTT---TATT-ATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTA 38599 || || | | || ||| || ||| |||||| || ||| || || ||||| | Sbjct 275680 TCGCTCAACCACTTGTCCATTAATCCTGAATAAGTA---AC-TTTTCTCCAAGGTTTTAA 275625 Query 38600 TTCCAAAATAACTATATGAATAATCTCTATCGTATGCTATTACATTATCGATTATATCTC 38659 ||||||||| || | | ||||||| || || |||| || || | | ||||| Sbjct 275624 ATCCAAAATAGTTAAAGACAAAATCTCTGTCATAGTCTATGGCAGAATTTAGTCTATCTT 275565 Query 38660 TATGTTT 38666 ||||||| Sbjct 275564 TATGTTT 275558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468489086697120