Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 2e-36
seq14 107 2e-18
>seq1
Length=33571687
Score = 167 bits (184), Expect = 2e-36
Identities = 327/478 (68%), Gaps = 4/478 (1%)
Strand=Plus/Plus
Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977
|| || | ||| |||||||| | ||| || | ||||| ||||| |||||| ||||||
Sbjct 24628347 TCATACTTTATGTATAATTTATCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACAT 24628406
Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037
|| ||||||||||| | ||| | | || | || | | ||| || || ||
Sbjct 24628407 TCATGTGGACACATTAAACTCCACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCC 24628466
Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTT 38097
|| | |||||| ||| || | ||| | | ||| | |||||| || ||| ||||||
Sbjct 24628467 GGGATCCATAAAGCATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTT 24628526
Query 38098 CTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGC 38156
|| || | ||||| ||||| || ||||| ||||| ||||| | ||| || | | ||
Sbjct 24628527 -TTGAGATCGAGAAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGC 24628585
Query 38157 TCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAA 38216
||| ||||| || | || || |||| | || | | |||||||| |||| ||| |
Sbjct 24628586 TCCAGGTCTCTTGTTTCCACCTTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAAT 24628645
Query 38217 CATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCG 38276
|||||| |||| |||||||||| |||||| | || || || |||||| | ||||
Sbjct 24628646 CATAGGAACTAAACCATTAGATACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCT 24628705
Query 38277 TATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGAT-ATTAAAGCGCATTGTT 38335
|||| | | ||| || || ||||| ||| | |||| | | |||||| ||| |
Sbjct 24628706 TATAGTGTGAACACTCAAACCAATGCCACCAGCA-GATTTGCTGACTAAAGCACATCTCT 24628764
Query 38336 TTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACT 38393
| | |||||| | || ||||| |||||||| || | |||| || | ||||||||
Sbjct 24628765 TCAGTGTATCATAAATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822
Score = 120 bits (132), Expect = 3e-22
Identities = 113/144 (78%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 37401 TTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTAT 37460
|||||||| ||||||||||| ||||| || ||||||| | || ||||||||||| |
Sbjct 24627669 TTTAGCTATTTCGCAACTAGCTTCTAAAGCACCATAATACAAAGTCTCGAAAATTTGGGT 24627728
Query 37461 ATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGC 37520
|| | || || || ||||| || || |||| ||||| || ||||| ||| |||||||
Sbjct 24627729 GTTCAGTAATTGAGCCTCTTCACTTTCAAATGGATAGCGCATTAATAAAAAGGCATCAGC 24627788
Query 37521 CAAACCCTGAACACCGATACCTAT 37544
||||||||||| ||| || |||||
Sbjct 24627789 CAAACCCTGAATACCAATGCCTAT 24627812
>seq14
Length=421909
Score = 107 bits (118), Expect = 2e-18
Identities = 206/304 (68%), Gaps = 0/304 (0%)
Strand=Plus/Minus
Query 37045 TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTA 37104
|||||||||||||| | | ||| || || || |||| || ||| | ||||||
Sbjct 277624 TGAATAGAACCATTGTTGGCAATTATTTCGTTTTTCATTTCATCATCCCAAAGATTTCTC 277565
Query 37105 CTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTT 37164
|| ||| || | |||| |||||||| |||| || ||||| || || || | |
Sbjct 277564 TTTGTTAAATCATTTAATAAATGTGGATTAACAATAATGAATTCTCCTGACAAAACACGT 277505
Query 37165 CTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGAT 37224
|| || || ||||| || || || || || | || ||||| || | ||||| |||| |
Sbjct 277504 CTAGTGTAAATATTACTTGTGTAAGGCTCCACTGATTCATTGTTTCCCAATATCTGAGCT 277445
Query 37225 GTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATT 37284
||||| || || ||||||||||| | || || ||| | | ||||| | |||
Sbjct 277444 GTAGAAGCTGTTGGCATTGGTGCAAGAAGTAGTGAATTACGAACTCCATACTTGGCTATT 277385
Query 37285 CTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATAT 37344
|| ||||| | || ||||||||| || | ||||| || ||||||||||||
Sbjct 277384 TTCAATTTTAATGCAGCCCAATCCCACAAGTTGGTTGGAGTCACATTCCACATATCATAC 277325
Query 37345 TGTA 37348
||||
Sbjct 277324 TGTA 277321
Score = 104 bits (114), Expect = 2e-17
Identities = 126/172 (73%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977
|| || | ||| || | ||| ||||| |||| ||||| ||||| ||| |||||||||
Sbjct 276477 TCTTACTTTATGTACAGTTTATTAAATTCATCTCCCCAAACATCAGGTAAGCCTGGACAT 276418
Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037
||| ||||||||||| | ||||| |||| | ||| | || ||||||||||||
Sbjct 276417 TCGTGTGGACACATTAAACTCCATTTCTCATTGTCAAGTACTCTTTGCATAAATAAATCT 276358
Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTA 38089
|| | |||||| ||| ||| | || | | |||||||||||| || ||||
Sbjct 276357 GGGATCCATAAGGCATAAAACAGTTCCCTTGCTCTATATTCTTCCTTACCTA 276306
Score = 102 bits (112), Expect = 8e-17
Identities = 217/319 (68%), Gaps = 4/319 (1%)
Strand=Plus/Minus
Query 38083 TTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATA 38142
|| || | ||| ||| |||| || || || || ||||| || ||||| || |||| |
Sbjct 276230 TTACCAATATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGA 276171
Query 38143 TAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTA 38202
|||| | | ||| || || ||||| | || || |||| |||| | | ||||| ||
Sbjct 276170 TAAAGAGCAAATGCACCAGGCCTTTTGTTTCCACCTTGATCAATAAAGCGTACTGTATTG 276111
Query 38203 TTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAA 38262
|| ||| ||| | ||||||||||| ||||| | || || | | | || |
Sbjct 276110 TTGAATACTCTGATCATAGGTACTAATCCATTTGCAAATCCATTATTGCTAGCAATCGCA 276051
Query 38263 GTACCCTTAGCTCGTATATTACTTATCGACAAT-CCTATTCCACCTGCATGTTTTGATAT 38321
|| || ||||||| |||||| | | | || || || |||||||| | |||| ||
Sbjct 276050 GTTCCTTTAGCTCTAATATTA-TGAACACTTATACCAATACCACCTGC-GGATTTGCTAA 275993
Query 38322 TAA-AGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380
||| || ||| ||||| || || || || ||||||||||| || || | || | |
Sbjct 275992 TAATTGCACATCTCTTTAATGTTTCGAAAATTCCTTCTATACTATCTTCAATCATGGTAA 275933
Query 38381 GTATAAAACAACTAGACAT 38399
| |||||||||||| ||||
Sbjct 275932 GAATAAAACAACTAAACAT 275914
Score = 102 bits (112), Expect = 8e-17
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383
|||| ||||||| ||||| || | ||||| || |||| ||| | || || |
Sbjct 277255 TTCTAGAACCACAAATCAT--TGACTTACTCCTTTGCTTACTGGTGAACCATTGTAGGAA 277198
Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443
||| ||||| | ||| || | ||| ||||||| ||||| || || |||||| |
Sbjct 277197 GAATATGGTCCATTTTCTTTGGCCAATTCACAACTAGCTTCTAAAGCTCCAAAATATAAT 277138
Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503
|||||||||||||| ||||||| | || |||| || ||||||| ||||| || |
Sbjct 277137 GTTTCGAAAATTTGAATATTTAGCTGCTGAGCCTCTTTACTCTCGAATGGATAGCGCATT 277078
Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTA 37543
|| | ||| | || ||||| || || || ||||||||||
Sbjct 277077 AACAAAAAAGCGTCTGCCAATCCTTGTACCCCGATACCTA 277038
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/159 (74%), Gaps = 4/159 (3%)
Strand=Plus/Minus
Query 36863 TCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATAT--ATAT 36920
|||| || ||||||||||| || |||||| | |||||| ||| | |||| | ||
Sbjct 277885 TCCAGCCATAAAAATGCATGGAAGTAAGTTTTTCAGTTGTAGGCTTAGCCATATGAACAT 277826
Query 36921 TGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACA 36980
| || ||||| ||| || ||||| || |||| || || ||||||| |||||||
Sbjct 277825 TTACA--GATTGTGATTGGTCAATAAAAGCGCCTCGATCTGCAGCCATTTTTAAAATAAT 277768
Query 36981 TTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTT 37019
||| |||| ||||||||| || |||||||||| || |||
Sbjct 277767 TTTCTGAGGTATCTCCCATACTGTTTTATATAATTCTTT 277729
Score = 84.2 bits (92), Expect = 2e-11
Identities = 169/247 (68%), Gaps = 8/247 (3%)
Strand=Plus/Minus
Query 38424 AAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTAT 38483
||| | |||||||||||||||| |||| | ||| || |||||||||||| |||||
Sbjct 275800 AAAAAGTGTAGGAGATGCATGTGTGAAGTAACGTTCAGAAGTATAATTATATGTCTCTAT 275741
Query 38484 TACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543
|| | || | ||| | |||| | ||| | || ||||| ||||||| ||||||
Sbjct 275740 GACTTTTTCAAGATCCTCTTTATGAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGG 275681
Query 38544 TCTTTCTATTATTT---TATT-ATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTA 38599
|| || | | || ||| || ||| |||||| || ||| || || ||||| |
Sbjct 275680 TCGCTCAACCACTTGTCCATTAATCCTGAATAAGTA---AC-TTTTCTCCAAGGTTTTAA 275625
Query 38600 TTCCAAAATAACTATATGAATAATCTCTATCGTATGCTATTACATTATCGATTATATCTC 38659
||||||||| || | | ||||||| || || |||| || || | | |||||
Sbjct 275624 ATCCAAAATAGTTAAAGACAAAATCTCTGTCATAGTCTATGGCAGAATTTAGTCTATCTT 275565
Query 38660 TATGTTT 38666
|||||||
Sbjct 275564 TATGTTT 275558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468489086697120
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