Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq236 91.5 1e-13 >seq236 Length=27037145 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/205 (72%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 21000 ACGTGAGCGATCA-GATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAG 21058 || |||||||||| ||| || || || | |||| ||||||||| || || || || || Sbjct 25468013 ACATGAGCGATCATGATG-GTGAGCAGCGAGTAGGAGGCGATGTTGAATGGCACACCAAG 25468071 Query 21059 GCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC-CG-AGCCACGTAA 21116 |||||| ||| ||| || || || || || ||||| ||||| || || || ||||| Sbjct 25468072 GCCCATATCGCCGGCTCTTTGATAAAGATGACAGGAGAGCTCGCCGTCGTAG--ACGTAG 25468129 Query 21117 AACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCAC 21176 |||||| | ||| || || ||||| ||||| || | |||| | ||||||||| Sbjct 25468130 AACTGAGCGAGCGAGTGGCAGGGCGGGAGGGCCATTTTCGGAATGTCCACAGGGTTCCAC 25468189 Query 21177 GCGCACATAACGATGCGCCGATCGT 21201 |||| ||| | || |||| |||| Sbjct 25468190 GCGCTCATTATTATTCGCCTGTCGT 25468214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427744207955040