Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq158 132 5e-26 seq335 127 2e-24 >seq158 Length=288468 Score = 132 bits (146), Expect = 5e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | ||||||||||| |||||||| |||||| || || | | || ||| Sbjct 90313 ACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCGGACAAAGTTCGCCCATCCTCG 90254 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 || || || |||||| |||| | ||| |||||||| || || || ||||| ||||| | Sbjct 90253 AGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGG 90194 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || |||| | ||| | |||||||| || || || |||| ||| | ||||| Sbjct 90193 ATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCAACTTCAAGGGTAATGGTCTTA 90134 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || ||||| || |||||||| ||||||||| || Sbjct 90133 CCAGTCAAAGTCTTTACGAAGATTTGCATACCT 90101 Score = 122 bits (134), Expect = 9e-23 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| |||||||| || ||||||| ||||| ||||||||||| || || ||| Sbjct 89648 GCCTCCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGA 89589 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || || | || | || |||||||| |||||||| |||||| | ||||| || || | Sbjct 89588 CAGAGTACGTCCA-TCCTCGAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGG 89530 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | ||||| |||||||| ||| | || | || | | || | ||||| | | ||| Sbjct 89529 GAATGCCCTCTTTGTC-TTGAATCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCA 89471 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||| ||| | |||||||||||||| || || || || || ||||| Sbjct 89470 ACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTAACAAAGATCTGCAT 89421 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| | ||| | ||| | |||| ||||| ||||||||||| ||||| ||| Sbjct 89420 GCCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCGGA 89361 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || || | || | || |||||||| || ||||| |||||| | ||||| || || | Sbjct 89360 CAGAGTACGTCCA-TCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGG 89302 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | ||||||||||| || ||| || || | | || | ||||||| | ||| | Sbjct 89301 GAATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAA 89242 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | ||||| || |||| ||||| ||||| || ||||| Sbjct 89241 CCTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCAT 89193 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611 ||| || || |||| || |||||||| |||||||| |||||| || || | || Sbjct 90545 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 90486 Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 |||||| || || ||||| | |||| | ||||| || ||||| || ||||| || || Sbjct 90485 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 90426 Query 139672 GGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730 ||| | || | ||| | | ||| | || |||| | ||| || || | || | | Sbjct 90425 C-TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGG 90367 Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 | ||||||||||| || || ||||| || |||||| || Sbjct 90366 TTTTGCCGGTCAAGGTCTTGACGAAGATCTGCATACCT 90329 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | ||||||||||| || || || || ||| || || | |||||| Sbjct 90769 ACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCG 90710 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || ||||| | |||| ||| ||||| || || || || ||||| ||||| | Sbjct 90709 AGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGG 90650 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || |||| | || | ||||| | || || || || | ||| | ||||| Sbjct 90649 ATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTA 90590 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || |||| || |||||||| |||||||| Sbjct 90589 CCAGTCAGAGTCTTTACGAAGATTTGCAT 90561 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611 ||| || || |||| || |||||||| |||||||| |||||| || || | || Sbjct 91001 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 90942 Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 |||||| || || ||||| | |||| | ||||| || ||||| || ||||| || || Sbjct 90941 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 90882 Query 139672 GGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730 ||| | || | ||| | | ||| | || |||| | ||| || || | || | | Sbjct 90881 C-TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGG 90823 Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 | ||||||||||| || || ||||| || |||||| || Sbjct 90822 TTTTGCCGGTCAAGGTCTTGACGAAGATCTGCATACCT 90785 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | ||||||||||| || || || || ||| || || | |||||| Sbjct 91225 ACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCG 91166 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || ||||| | |||| ||| ||||| || || || || ||||| ||||| | Sbjct 91165 AGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGG 91106 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || |||| | || | ||||| | || || || || | ||| | ||||| Sbjct 91105 ATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTA 91046 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || |||| || |||||||| |||||||| Sbjct 91045 CCAGTCAGAGTCTTTACGAAGATTTGCAT 91017 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611 ||| || || |||| || |||||||| |||||||| |||||| || || | || Sbjct 91457 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 91398 Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 |||||| || || ||||| | |||| | ||||| || ||||| || ||||| || || Sbjct 91397 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 91338 Query 139672 GGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730 ||| | || | ||| | | ||| | || |||| | ||| || || | || | | Sbjct 91337 C-TGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGG 91279 Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 | ||||||||||| || || ||||| || |||||| || Sbjct 91278 TTTTGCCGGTCAAGGTCTTGACGAAGATCTGCATACCT 91241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/122 (78%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCT 139619 ||||| || || || ||||||||||| || || || ||||| || | |||||||| | Sbjct 89852 GTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCA-TCTTCGAGTT 89794 Query 139620 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTT 139679 | ||||||||| | ||||| | |||||||| ||||| || ||||||||||| ||| || Sbjct 89793 GCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGTC-TTGAATT 89735 Query 139680 TT 139681 || Sbjct 89734 TT 89733 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 ||||||||||| || || || || ||| || || | ||||||||||| || ||| Sbjct 91669 GTAGACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCGAGCTGCTTTCCA 91610 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || | |||| ||| ||||| || || || || ||||| ||||| ||| || ||| Sbjct 91609 GCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTT 91550 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | || || || || | ||| | ||||| || |||| || Sbjct 91549 ACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTC 91490 Query 139748 TTTACGAATATTTGCAT 139764 |||||||| |||||||| Sbjct 91489 TTTACGAAGATTTGCAT 91473 >seq335 Length=1594555 Score = 127 bits (140), Expect = 2e-24 Identities = 168/229 (73%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | ||| | |||| || ||||| || |||||||| || || Sbjct 906273 CCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 906214 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| | | |||||| | |||||||||||| |||| ||||| ||||| || ||||| Sbjct 906213 AGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGA 906154 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||| | |||| | | ||| | ||||||| || ||| || Sbjct 906153 ATTCCTTCTTTGTC-CTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTAC 906095 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTT-ACGAATATTTGCAT 139764 || | || | ||||| || |||| |||||| ||||| |||||||| Sbjct 906094 TTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCAT 906046 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || ||||| || ||||||| || ||||| || ||||| || || || Sbjct 905129 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 905070 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| |||| ||||| |||||||| ||||| Sbjct 905069 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGG 905011 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || |||||||| |||||| ||| | | ||| | ||||| | || |||||| Sbjct 905010 AATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCAC 904951 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || ||||| ||||| ||||| || || || ||||| Sbjct 904950 TTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCAT 904903 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || | |||| ||| ||||||||||||||||| || || Sbjct 906729 CCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906670 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || ||||||||||| ||| |||| ||||| ||||| || || || Sbjct 906669 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906610 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| || || ||| |||| | || | | ||| | ||||||| | || || Sbjct 906609 ATGCCTTCCTTATC-CTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906551 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | || || ||||| || ||||| ||||| || ||||| Sbjct 906550 TTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGA-ATGTTATAATCGCT 139596 || ||||| | ||| | ||| | || | || || |||||||| ||||| ||||| Sbjct 906044 CCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATCAGA 905985 Query 139597 CATTGTG-CT-CGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || || || | | |||| || |||||||||||| | || |||||||| || || ||| Sbjct 905984 CAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGA 905925 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713 || |||||||||||||| ||| | || | ||| | | ||| | || || | | ||| Sbjct 905924 GGGATGCCTTCTTTGTC-TTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCTC 905866 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | || | ||||| || ||||| ||||| || || |||||||| Sbjct 905865 TACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 139567 CGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACC 139626 ||| ||||||||||||||||| || || | || || || || ||||||||||| Sbjct 906472 CGTGGACTCTTTTTGAATGTTGTAGTCTGAAAGGGTCCTTCCATCCTCCAGCTGTTTACC 906413 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TT 139685 ||| |||| ||||| ||||| || || || |||||||| || || ||| |||| | | Sbjct 906412 GGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTATC-CTGAATTTTAGCCT 906354 Query 139686 TTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 | | | ||| | ||||||| | || || || | ||| | || || || || || | Sbjct 906353 TGACGTTTTCGATAGTGTCGGAAGCTTCGACTTCTAAGGTTATGGTTTTACCAGTTAAGG 906294 Query 139746 TTTTTACGAATATTTGCAT 139764 |||| || || || ||||| Sbjct 906293 TTTTGACAAAAATCTGCAT 906275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496026187521600