Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 196 7e-45 seq14 118 2e-21 seq410 100 4e-16 >seq1 Length=33571687 Score = 196 bits (216), Expect = 7e-45 Identities = 324/465 (70%), Gaps = 2/465 (0%) Strand=Plus/Plus Query 79852 TATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACAC 79911 |||||| || || || |||||||||||||| ||||||||||||||| | |||||| Sbjct 24628359 TATAATTTATCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACAC 24628418 Query 79912 ATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 79971 || || ||||| | || || |||| ||||| || | || || ||||| | | Sbjct 24628419 ATTAAACTCCACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAA 24628478 Query 79972 GCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 80030 || ||| || || ||||| | ||| | || || || ||||| |||||||| |||||||| Sbjct 24628479 GC-ATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAG 24628537 Query 80031 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTT 80090 || | | || |||| ||||||||||||||| || ||||| | |||| |||| || Sbjct 24628538 AAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTT 24628597 Query 80091 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 80150 |||||| || ||||| | ||| | || |||||||| || ||||| | ||| |||| | Sbjct 24628598 GTTTCCACCTTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAA 24628657 Query 80151 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 80210 |||||| ||| ||| || || || || || | ||| |||| | ||| | || Sbjct 24628658 ACCATTAGATACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAAC 24628717 Query 80211 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 80270 | ||| || || || || ||| || ||| || |||| || | |||||||| Sbjct 24628718 ACTCAAACCAATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATA 24628777 Query 80271 GATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315 || || || || || || ||| |||| |||| || ||||| || Sbjct 24628778 AATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822 Score = 165 bits (182), Expect = 1e-35 Identities = 307/448 (69%), Gaps = 7/448 (2%) Strand=Plus/Plus Query 78832 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 78891 ||||| || | ||| | ||| ||| ||||| |||||||| || | || ||||||||| Sbjct 24627100 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 24627159 Query 78892 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 78951 || | || |||||||| | ||| ||||| | ||||| || | | ||| | || || Sbjct 24627160 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCA 24627219 Query 78952 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCT 79008 |||| ||| | ||||||| || || | ||| || || |||||| ||||| Sbjct 24627220 GGAATCCTTGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 24627279 Query 79009 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 79068 || | ||| | | || || || || || | | | ||| ||||| || || || ||| Sbjct 24627280 TCGTCCCACAGATCCCTGTCTGTCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAAT 24627339 Query 79069 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTA 79128 |||||||| | || | || |||||||| || || || || || || | |||||| || Sbjct 24627340 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 24627399 Query 79129 TTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTA 79188 || ||||||||||| || || || || |||||||| || || | || ||| ||| | | Sbjct 24627400 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 24627459 Query 79189 AGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGA 79246 | ||| ||| |||| |||||| |||| || | ||| ||||| ||| | || Sbjct 24627460 ACACC--ATGTTCTGCAATTTTAGCTTTCAGGGCAGTCCAGTCCCAGAGACTGGTTGGTG 24627517 Query 79247 CAACATTCCAAAGATCATATTGTAGAAT 79274 |||||||| | || ||||||| ||| Sbjct 24627518 TTACATTCCACATGTCGTATTGTAAAAT 24627545 Score = 98.7 bits (108), Expect = 1e-15 Identities = 229/345 (66%), Gaps = 8/345 (2%) Strand=Plus/Plus Query 79459 ATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTA 79518 ||||| || || || || ||| | || || |||| |||||||| || || || ||||| Sbjct 24627886 ATACCAATGGGCCTGTGCCTCGTGTTGGACCTTTCTGCTTCTGGGATGGGGTAGTAATTT 24627945 Query 79519 ATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGA 79578 | || |||||||||| | ||| || | | ||||| | || ||||| ||||| | Sbjct 24627946 AGGTCAATAATTTTATCCAAATTTCTTGTTGTGACTTTTGCGACTTCCTTAAGTTTTGCA 24628005 Query 79579 AAATCAAATCGTCCATCTA-------TTACAAACATGTTCAACGCGACAGATGCCAGATT 79631 ||||| | ||| | || |||||||||| || | || | |||||| | ||| Sbjct 24628006 AAATCGTA-CGTTTTTTTACTGGTATTTACAAACATATTAACGGCAATAGATGCTAAATT 24628064 Query 79632 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACA 79691 || |||||||| || | | | | ||| || | | ||| ||||| | ||||| | Sbjct 24628065 GCACACGGCTACTTCGTCTGGAGAAGAATACTGCACAACTTCCGTGCATAAATTACTGCT 24628124 Query 79692 CTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 79751 | || || || | ||||||||||| || ||||| ||| || || | || Sbjct 24628125 TCTGATAGTACCAAGGTTTTGTTGATTGGATTTGCGATTACAGTGATCTTTGTATAACAT 24628184 Query 79752 GAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 79796 | | || || |||||||||| ||||| || |||||| |||| Sbjct 24628185 GTAAGGGGTTCCAGTTTCAACTTGAGACATTAAAATCGCAGTCCA 24628229 >seq14 Length=421909 Score = 118 bits (130), Expect = 2e-21 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 78997 TTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 79056 || || || || |||| ||| | ||||||| |||||| | | | | ||| |||||| Sbjct 277594 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277535 Query 79057 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCC 79116 || | |||||||| ||||| || | | ||||||||||||||| || || || ||| Sbjct 277534 ACAATAATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277475 Query 79117 ACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGC 79169 || |||||||| |||||||| || ||||| || || || |||||||| ||||| Sbjct 277474 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTTGGCATTGGTGC 277422 Score = 98.7 bits (108), Expect = 1e-15 Identities = 199/296 (67%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 79507 GGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCC 79566 ||||||| ||| | ||| |||||||||| | |||| | | | ||| || || || Sbjct 276917 GGATAATGATTCAGATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCT 276858 Query 79567 TTTAGTTTGAGAAAATCAAA------TCGTCCATCTATTACAAACATGTTCAACGCGACA 79620 || | ||| ||||||| | | | || | |||||||| || | || | Sbjct 276857 TTCAATTTTAGAAAATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATG 276798 Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 ||||| | |||||| || ||||| || || | | | |||||||| ||||||||||| Sbjct 276797 GATGCTAAATTACACACTGCTACTTCGTTTGGAGAAGAGTATTGTATAATTTCAGTGCAT 276738 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 | ||||| | ||||| ||||| | |||||||||||| || || || ||| Sbjct 276737 AAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTTGATTTACGATTGCAGTGATCT 276678 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 79796 ||||| || || | ||||| |||||||||| || | || || ||| || |||| Sbjct 276677 TTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCTTTTAAAATGGCAGTCCA 276622 Score = 95.1 bits (104), Expect = 2e-14 Identities = 200/292 (68%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 80311 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG-GTAGGAGAAGCGTGCGT 80369 || || |||||||| || | |||| | ||| ||| ||| |||||||| || || || Sbjct 275836 CACCTGGACATTTGTTGGTGTATAGTACATGCAAAAAAAAAGTGTAGGAGATGCATGTGT 275777 Query 80370 AAACCATTTTTCAGACAGTAGA-TTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 80428 || | |||||| |||| | || || ||||| || || ||| | |||| || || Sbjct 275776 GAAGTAACGTTCAGA-AGTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTAT 275718 Query 80429 GAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-ATTT 80487 ||| |||| || || | ||| | ||| | || |||| ||||| | ||||| ||| Sbjct 275717 GAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGGTCGCTCAACCA-CTTGTCCATTA 275659 Query 80488 ATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 80547 || | || |||||| ||| ||||| |||||||| ||||||||||| | ||| ||| Sbjct 275658 ATCCTGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCT 275599 Query 80548 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 80599 | || || || | || || ||| |||| |||| ||| | || || || Sbjct 275598 CTGTCATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTTTTGAATTATAT 275547 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 79308 ATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGT 79367 ||| ||||| | | || ||| ||||||||||| || ||||| ||||| |||| | || Sbjct 277195 ATATGGTCCATTTTCTTTGGCCAATTCACAACTAGCTTCTAAAGCTCCAAAATATAATGT 277136 Query 79368 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG 79427 ||||||||| | |||| || | || || ||| || || |||||||| | | Sbjct 277135 TTCGAAAATTTGAATATTTAGCTGCTGAGCCTCTTTACTCTCGAATGGATAGCGCATTAA 277076 Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACC 79463 | ||| |||||||| |||||||| || || ||||| Sbjct 277075 CAAAAAAGCGTCTGCCAATCCTTGTACCCCGATACC 277040 >seq410 Length=4553683 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310 |||||||| || ||||||||||||||||||| ||| || || ||||| || | |||||| Sbjct 2615930 TACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAGCGAGCCTCA 2615871 Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370 || | ||||||||| | || || ||| | | ||| ||||| || || || || | Sbjct 2615870 GTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCCGAG 2615811 Query 50371 GCTGCAAAAAACGCCAATACATG 50393 || ||||| || ||||| ||||| Sbjct 2615810 GCAGCAAAGAATGCCAAAACATG 2615788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718214049960720