Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq796 118 8e-22
seq158 104 2e-17
seq335 91.5 1e-13
>seq796
Length=23603
Score = 118 bits (130), Expect = 8e-22
Identities = 134/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 42931 TTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGT 42990
||||||||||||||||| || | || || || |||||||| ||||||||||||||||||
Sbjct 4676 TTGTAATCGGACAATGTTCGACCATCCTCTAACTGTTTGCCAGCAAAAATCAATCGCTGT 4735
Query 42991 TGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCG 43050
||||| | || | |||||| || || ||| |||| || | | | || ||
Sbjct 4736 TGATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTTCTATAGTATCT 4795
Query 43051 CCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
||| ||||| |||| ||||| || || || || | |||||| |||||||||||||||
Sbjct 4796 GAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGACAAAAATTTGCATT 4855
>seq158
Length=288468
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||| | ||||| || |||||||| | |||| ||| || || | |||||||||||
Sbjct 90560 GCCTCCCCTAAGTCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGA 90501
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
|| ||||| | || || | ||| || || || |||||||| | ||| || || | ||
Sbjct 90500 CAGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGG 90441
Query 43002 CACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| |||||| || || ||| ||| ||||||| | | | || ||| ||||||||
Sbjct 90440 GATACCTTCCTTATC-CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGA 90382
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| || || ||||| ||||| | || || || || || |||||
Sbjct 90381 CTTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90333
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||| | ||||| || |||||||| | |||| ||| || || | |||||||||||
Sbjct 91016 GCCTCCCCTAAGTCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGA 90957
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
|| ||||| | || || | ||| || || || |||||||| | ||| || || | ||
Sbjct 90956 CAGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGG 90897
Query 43002 CACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| |||||| || || ||| ||| ||||||| | | | || ||| ||||||||
Sbjct 90896 GATACCTTCCTTATC-CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGA 90838
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| || || ||||| ||||| | || || || || || |||||
Sbjct 90837 CTTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90789
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||| | ||||| || |||||||| | |||| ||| || || | |||||||||||
Sbjct 91472 GCCTCCCCTAAGTCTCAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGA 91413
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
|| ||||| | || || | ||| || || || |||||||| | ||| || || | ||
Sbjct 91412 CAGAGTACGGCCATCTTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGG 91353
Query 43002 CACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| |||||| || || ||| ||| ||||||| | | | || ||| ||||||||
Sbjct 91352 GATACCTTCCTTATC-CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGA 91294
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| || || ||||| ||||| | || || || || || |||||
Sbjct 91293 CTTCTAAAGTGATGGTTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 91245
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42897 TAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTC 42956
||| ||||| |||| ||| ||| || || | |||||| ||||| | ||||| | ||
Sbjct 91913 TAAGACCAAGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCGGAGAGCGTACGACCATC 91854
Query 42957 GTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTC 43016
||||||||||| |||||||| || || ||||| || || | ||| | || ||||| ||
Sbjct 91853 TTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGCGGGATTCCCTCTTTGTC 91794
Query 43017 GCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076
||| | ||||| | | | || || |||||||| || | || || ||
Sbjct 91793 CTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGACTTCAAGTGTGATGGT 91734
Query 43077 TTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||| ||||| | ||| ||||| || || |||||
Sbjct 91733 TTTGCCGGTCAAAGTCTTCACGAAGATCTGCAT 91701
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|||||||| |||| | ||||| |||| ||| ||| || || | ||||||||||||
Sbjct 90331 CCTCCACGAAGTCGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCGGAC 90272
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || || | || || | ||| || || ||||| || || ||||| ||||| | ||
Sbjct 90271 AAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGGGGA 90212
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| | || || | ||| ||||||| || || ||
Sbjct 90211 ATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCAACT 90152
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || || || || || | ||| || || || ||||||||
Sbjct 90151 TCAAGGGTAATGGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 90105
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978
|||||||| | ||||| || |||||||| ||| | || || | ||| || || ||||||
Sbjct 89839 TCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAA 89780
Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038
|||| | ||| ||||| | || | ||||||||| || || | ||||| |
Sbjct 89779 ATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTC 89720
Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098
||| || || ||| ||||| || | || || ||||| || || || || || |||
Sbjct 89719 TCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACA 89660
Query 43099 AAAATTTGCAT 43109
|||||||||||
Sbjct 89659 AAAATTTGCAT 89649
>seq335
Length=1594555
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||| || || | | || | ||||| ||| || ||||| | ||||||||| ||
Sbjct 905814 GCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATCTGA 905755
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| ||| | | | || |||| ||| || || || ||||||| ||||||||||| | ||
Sbjct 905754 TAGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGG 905695
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| ||||||||| || ||| |||| || | ||| || || || || ||
Sbjct 905694 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCAAC 905635
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || ||||| || || ||||| || ||||||||||||||
Sbjct 905634 CTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTGCAT 905587
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960
||||| || | ||| |||||| || | |||||| || || | |||||| | || ||
Sbjct 905111 ACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGTCCATCTTCT 905052
Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020
|||||||| || ||||| || | ||||| ||||| | || | || ||||| || |
Sbjct 905051 AATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGG 904992
Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080
|| ||||||| | ||| ||||| ||||| || || | || || |||||
Sbjct 904991 ATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCACTTCCAGAGTGATGGTTTTG 904932
Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| || | ||||||||||| || ||||| ||
Sbjct 904931 CCAGTCAAGGTTTTCACAAAGATCTGCATCTT 904900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381341256849684
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