Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1 201 2e-46
seq14 120 4e-22
seq410 91.5 2e-13
>seq1
Length=33571687
Score = 201 bits (222), Expect = 2e-46
Identities = 325/465 (70%), Gaps = 2/465 (0%)
Strand=Plus/Plus
Query 71935 TATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACAC 71994
|||||| || || || ||||||||| ||| ||||||||||||||||| ||||||
Sbjct 24628359 TATAATTTATCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACAC 24628418
Query 71995 ATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 72054
|| || ||||| | || ||| |||| ||||| || | || || ||||| | |
Sbjct 24628419 ATTAAACTCCACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAA 24628478
Query 72055 GCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113
|| ||| || || ||||| | ||| | || || || ||||| |||||||| ||||||||
Sbjct 24628479 GC-ATAGAAAAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAG 24628537
Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173
|| | | || |||| ||||||||||||||| || ||||| | |||| || | ||
Sbjct 24628538 AAATTCGAAGATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTT 24628597
Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233
|||||| || ||||| | ||| | || |||||||| || ||||| | ||| |||| |
Sbjct 24628598 GTTTCCACCTTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAA 24628657
Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAAT 72293
|||||| ||| |||| || || || || || | ||| |||| | ||| || ||
Sbjct 24628658 ACCATTAGATACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAAC 24628717
Query 72294 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 72353
| ||| || || || || ||| || ||| || |||| || | ||||||||
Sbjct 24628718 ACTCAAACCAATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATA 24628777
Query 72354 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398
|| || || ||||| || || |||| |||| || ||||| ||
Sbjct 24628778 AATTCCTTCAATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822
Score = 141 bits (156), Expect = 1e-28
Identities = 265/389 (68%), Gaps = 3/389 (1%)
Strand=Plus/Plus
Query 70915 GCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 70974
|||||||| | ||| | |||||| ||||| |||||||| || | || |||||||||
Sbjct 24627100 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 24627159
Query 70975 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 71034
|| | || |||||||| | ||| ||||| | ||||| || | | ||| | || ||
Sbjct 24627160 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCA 24627219
Query 71035 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCT 71091
|||| ||| | ||||||| || || | ||| || || ||| || |||||
Sbjct 24627220 GGAATCCTTGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 24627279
Query 71092 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAAT 71151
|| | ||| | | || || || || || | | | ||||||||| || || || |||
Sbjct 24627280 TCGTCCCACAGATCCCTGTCTGTCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAAT 24627339
Query 71152 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTA 71211
|||||||| | || | | |||||||| || || || || || || | || || ||
Sbjct 24627340 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 24627399
Query 71212 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTA 71271
|| ||||||||||| || || || || || ||||| || || | || | | ||| | |
Sbjct 24627400 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 24627459
Query 71272 AGACCATGTGATCGGATTTTATCTTTTAG 71300
| ||||||| | |||||| |||| ||
Sbjct 24627460 ACACCATGTTCTGCAATTTTAGCTTTCAG 24627488
>seq14
Length=421909
Score = 120 bits (132), Expect = 4e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108
|||||| || ||| | ||||| || ||||| || || |||| ||| | |||||
Sbjct 277625 CTGAATAGAACCATTGTTGGCAATTATTTCGTTTTTCATTTCATCATCCCAAAGATTTCT 277566
Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168
|| |||||| | | | | ||| |||||||| | |||||||| ||||| || |
Sbjct 277565 CTTTGTTAAATCATTTAATAAATGTGGATTAACAATAATGAATTCTCCTGACAAAACACG 277506
Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228
| ||||||||||||||| || || || |||||||| ||||| |||||||| || |||||
Sbjct 277505 TCTAGTGTAAATATTACTTGTGTAAGGCTCCACTGATTCATTGTTTCCCAATATCTGAGC 277446
Query 71229 AGTTGATGCAGTCGGCATAGGTGC 71252
|| || || || ||||| |||||
Sbjct 277445 TGTAGAAGCTGTTGGCATTGGTGC 277422
Score = 105 bits (116), Expect = 9e-18
Identities = 229/343 (67%), Gaps = 6/343 (2%)
Strand=Plus/Minus
Query 71543 TACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAA 71602
|||| | |||||||| | ||| || |||| ||||| | ||||||| ||| |
Sbjct 276964 TACCAACTGGTCTGTGCATTAAATTGGATTTTTCTGCTTCGATGAGTGGATAATGATTCA 276905
Query 71603 TATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAA 71662
||| |||||||||| | ||| | | | ||| || || || || | ||| ||||
Sbjct 276904 GATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCTTTCAATTTTAGAA 276845
Query 71663 AATCAAA------TCTCCCATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTAC 71716
||| | | | || | ||||||| || | |||| ||||| | |||||
Sbjct 276844 AATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATGGATGCTAAATTAC 276785
Query 71717 AAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACT 71776
| || ||||| || || | | | |||||||||||||||||||| | |||||| | |
Sbjct 276784 ACACTGCTACTTCGTTTGGAGAAGAGTATTGTATAATTTCAGTGCATAAATTACTGCTTT 276725
Query 71777 TGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAA 71836
| || ||||| | |||||||||||| || || || ||| ||||| || |||
Sbjct 276724 TAATAGTTCCAAGATTTTGTTGATTTGATTTACGATTGCAGTGATCTTTATAGAGCATAT 276665
Query 71837 ACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 71879
| ||||| |||||||||| || | || || ||| || ||||
Sbjct 276664 AAGGAGTTCCAGTTTCAACTTGTGCTTTTAAAATGGCAGTCCA 276622
Score = 98.7 bits (108), Expect = 1e-15
Identities = 201/292 (69%), Gaps = 5/292 (2%)
Strand=Plus/Minus
Query 72394 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG-GTAGGAGAAGCGTGCGT 72452
|| || |||||||| || | |||| | ||| ||| ||| |||||||| || || ||
Sbjct 275836 CACCTGGACATTTGTTGGTGTATAGTACATGCAAAAAAAAAGTGTAGGAGATGCATGTGT 275777
Query 72453 AAACCATTTTTCAGACAGTAGA-TTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 72511
|| | |||||| |||| | || || ||||| || || ||| | |||| || ||
Sbjct 275776 GAAGTAACGTTCAGA-AGTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTAT 275718
Query 72512 GTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTT-ATTT 72570
| | |||| || || | ||| | ||||| || |||| ||||| | ||||| |||
Sbjct 275717 GAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGGTCGCTCAACCA-CTTGTCCATTA 275659
Query 72571 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 72630
|| | || ||||| ||| ||||| |||||||| ||||||||||| | ||| |||
Sbjct 275658 ATCCTGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCT 275599
Query 72631 CGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATAT 72682
| || || || | ||||| ||| |||| |||| ||| | || |||||
Sbjct 275598 CTGTCATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTTTTGAATTATAT 275547
Score = 86.0 bits (94), Expect = 8e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 71392 TATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTT 71451
|||||||| | || || ||| | ||||||||| || ||||| |||||| |||| | |||
Sbjct 277194 TATGGTCCATTTTCTTTGGCCAATTCACAACTAGCTTCTAAAGCTCCAAAATATAATGTT 277135
Query 71452 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGA 71511
|||||||| | |||| || | || || || || || |||||||| | |
Sbjct 277134 TCGAAAATTTGAATATTTAGCTGCTGAGCCTCTTTACTCTCGAATGGATAGCGCATTAAC 277075
Query 71512 ATAAACGCGTCTGCTAATCCTTGAACGCCAATACC 71546
| ||| |||||||| |||||||| || || |||||
Sbjct 277074 AAAAAAGCGTCTGCCAATCCTTGTACCCCGATACC 277040
>seq410
Length=4553683
Score = 91.5 bits (100), Expect = 2e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415
|||||||| || ||||||||||||||||||| ||| || || ||||| || | |||||
Sbjct 2615930 TACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAGCGAGCCTCA 2615871
Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475
|| ||||| ||||| | || || ||| | | ||| || || || || || || |
Sbjct 2615870 GTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCCGAG 2615811
Query 42476 GCTGCAAAAAACGCCAATACATG 42498
|| ||||| || ||||| |||||
Sbjct 2615810 GCAGCAAAGAATGCCAAAACATG 2615788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671088042414480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |