Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq335 132 5e-26 seq158 120 3e-22 seq796 89.7 5e-13 >seq335 Length=1594555 Score = 132 bits (146), Expect = 5e-26 Identities = 167/228 (73%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | ||| | ||| | ||||| || || || || || |||||||| || Sbjct 906273 CCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 906214 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | | |||||| | ||||||||||||| |||| ||||| ||||| || ||||| Sbjct 906213 AGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGA 906154 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| |||||| ||| | | ||| | ||||| | || |||||| Sbjct 906153 ATTCCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTACT 906094 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTT-ACGAATATTTGCAT 143184 || | ||| | ||||| || |||| |||||| ||||| |||||||| Sbjct 906093 TCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCAT 906046 Score = 125 bits (138), Expect = 7e-24 Identities = 168/230 (73%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGT-ATGTTGTAATCGCT 143016 || ||||| | ||| | ||| | ||| | ||| ||||||||||| ||||||||||| Sbjct 906044 CCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATCAGA 905985 Query 143017 CATTGTG-CT-CGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 || || || | | |||| ||||||||||||||| | || |||||||| || || ||| Sbjct 905984 CAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGA 905925 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || |||||||||||||| ||| || ||| | | ||| | || || | | ||| Sbjct 905924 GGGATGCCTTCTTTGTCTTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCTCT 905865 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | ||| | ||||| || ||||| ||||| || || |||||||| Sbjct 905864 ACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCAT 905815 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| || ||||| || || |||| || || || || || || ||||| || Sbjct 905129 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 905070 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||||||||||||| |||| ||||| |||||||| ||||| Sbjct 905069 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGG 905011 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || |||||||| ||||| ||| | | ||| | ||||| | || || || Sbjct 905010 AATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCAC 904951 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | || ||||| ||||| ||||| || || || ||||| Sbjct 904950 TTCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCAT 904903 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||||||||| | ||| | ||| | ||| | || ||||||||||| || |||||||| Sbjct 905814 GCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATCTGA 905755 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| || ||||| ||||| || || || | |||||||| || ||||| || || Sbjct 905754 TAGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGG 905695 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||||||||| ||||| ||| | | ||| | || || | | ||| || Sbjct 905694 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCAAC 905635 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || || || |||| || ||||| || |||||||| Sbjct 905634 CTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTGCAT 905587 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| || | || | ||| | ||| | || |||||||| || ||||||||||| Sbjct 905586 GCCTCCACGAAGTCGGAGAACAAGATGGAGCGTTGATTCTTTCTGAATGTTGTAATCAGA 905527 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || || |||||| || || || |||||| | |||||||| ||||| || ||||| Sbjct 905526 AAGAGTTCTTCCGTCTTCAAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGG 905467 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || |||||||| ||||| || | | ||| | || || | | ||| || Sbjct 905466 GATACCCTCTTTGTCCTGGATTTTGGCCTTGACATTTTCAATTGTATCTGAAGCTTCGAC 905407 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | ||||| || ||||| || || || || |||||||| Sbjct 905406 CTCCAAGGTGATGGTCTTTCCAGTCAAAGTCTTGACAAAGATTTGCAT 905359 >seq158 Length=288468 Score = 120 bits (132), Expect = 3e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| ||||| || |||||||||||| || || | | || |||||||| || ||| Sbjct 90301 GTAGACTCTTTCTGAATGTTGTAATCGGACAAAGTTCGCCCATCCTCGAGTTGCTTTCCA 90242 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||| | ||| |||||||| || || || ||||| ||||| || || ||| Sbjct 90241 GCAAAGATTAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTT 90182 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | ||| | ||||| | || ||| ||||||| || | ||||| || ||||| || Sbjct 90181 ACGTTTTCAATTGTGTCGGAGGCTTCAACTTCAAGGGTAATGGTCTTACCAGTCAAAGTC 90122 Query 143168 TTTACGAATATTTGCATAGCT 143188 |||||||| ||||||||| || Sbjct 90121 TTTACGAAGATTTGCATACCT 90101 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| |||||||| || || |||| ||||||||||||||| || ||||| ||| Sbjct 89648 GCCTCCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGA 89589 Query 143017 CATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 || || | || | || ||||| || |||||||| |||||| | ||||| || || | Sbjct 89588 CAGAGTACGTCCA-TCCTCGAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGG 89530 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | ||||| |||||||| ||| || || | | || | ||||| | | || | Sbjct 89529 GAATGCCCTCTTTGTCTTGAATCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAA 89470 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | |||| || | |||||||||||||| || || || || || ||||| Sbjct 89469 CCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTAACAAAGATCTGCAT 89421 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTG 143040 |||| ||| ||||| ||||| |||||||| || || ||||| || | ||||||||||| Sbjct 89851 TGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCA-TCTTCGAGTTG 89793 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 ||||||||| | ||||| | |||||||| ||||| || ||||||||||| |||||| Sbjct 89792 CTTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTT 89733 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 || | | || | ||| || | | ||| ||||| | ||| | || ||||| || Sbjct 89732 AGCCTTGACATTCTCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGT 89673 Query 143161 CAATGTTTTTACGAATATTTGCAT 143184 | || || || || |||||||| Sbjct 89672 AAGCGTCTTAACAAAAATTTGCAT 89649 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031 ||| || ||||||| || || ||||| || |||||||||||| || || | || Sbjct 90545 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 90486 Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||||||||| || ||||| | |||| | ||||| || ||||| || ||||| || || Sbjct 90485 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 90426 Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151 ||| || ||| | | ||| | || || | | || ||||| | ||| | || Sbjct 90425 CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 90366 Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 ||||||||||| || || ||||| || |||||| || Sbjct 90365 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCATACCT 90329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031 ||| || ||||||| || || ||||| || |||||||||||| || || | || Sbjct 91001 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 90942 Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||||||||| || ||||| | |||| | ||||| || ||||| || ||||| || || Sbjct 90941 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 90882 Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151 ||| || ||| | | ||| | || || | | || ||||| | ||| | || Sbjct 90881 CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 90822 Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 ||||||||||| || || ||||| || |||||| || Sbjct 90821 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCATACCT 90785 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031 ||| || ||||||| || || ||||| || |||||||||||| || || | || Sbjct 91457 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 91398 Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||||||||| || ||||| | |||| | ||||| || ||||| || ||||| || || Sbjct 91397 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 91338 Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151 ||| || ||| | | ||| | || || | | || ||||| | ||| | || Sbjct 91337 CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGGT 91278 Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 ||||||||||| || || ||||| || |||||| || Sbjct 91277 TTTGCCGGTCAAGGTCTTGACGAAGATCTGCATACCT 91241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | ||||| || | ||| | || ||||||||||| ||||| || || | Sbjct 90103 CCTCCACGAAGTCGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTATAGTCTGAC 90044 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||||| || || | |||||| ||||| |||||| | ||||| || || || Sbjct 90043 AATGTGCGACCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGG 89984 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || |||||||| |||||| || | | ||| | |||||| | | || ||| Sbjct 89983 ATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCGACT 89924 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||| || | || || || || | ||| || ||||| || |||||| Sbjct 89923 TCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCATA 89876 >seq796 Length=23603 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 142995 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTTCGAGTTGTTTACCAGCATA 143052 |||| ||||||||||||||| || ||| |||| || || | ||||| |||||| | Sbjct 4665 CTTTCTGTATGTTGTAATCGGACAATGT--TCGACCATCCTCTAACTGTTTGCCAGCAAA 4722 Query 143053 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 143112 |||| || || ||||| ||||| || ||||| || || ||||| ||| | | Sbjct 4723 AATCAATCGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATT 4782 Query 143113 TTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 143172 ||| | || || | | ||| || || | ||| | |||||||| ||||| ||||| || Sbjct 4783 TTCTATAGTATCTGAAGCTTCGACCTCTAAAGTTATGGTCTTGCCTGTCAAAGTTTTGAC 4842 Query 143173 GAATATTTGCAT 143184 || |||||||| Sbjct 4843 AAAAATTTGCAT 4854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506975752827360