Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq335 105 6e-18 >seq335 Length=1594555 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 ||||||| || | | |||| || | ||| ||||| |||||||| ||||| || | Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906442 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | | ||||||||||||||||| ||| | || || | |||||| || || Sbjct 906441 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906382 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||| || || || |||||| || || | ||| ||| ||| || || | Sbjct 906381 ATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGACT 906322 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || | ||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct 906321 TCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 ||||||| || | | || |||| || | ||| ||||| |||||||| ||||| || | Sbjct 906731 TTCCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTG 906672 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 | || | | ||||||||||||||||| ||| | || || | |||||| || | Sbjct 906671 AAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTG 906612 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | ||| || || || |||||| || || | ||| ||| ||| || || Sbjct 906611 GGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906552 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | ||| ||||||||||| ||||| |||||||| ||||| ||||| Sbjct 906551 CTTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 18845 GTAGACTCCTTTTGA-ATATTGTAATCCGCCATTGTTT-TGGCGTCCT-CCAGCTGTTTA 18901 || || || ||||| || |||||||| | || |||| || | |||| |||| |||||| Sbjct 906014 GTTGATTCTTTTTGGGATGTTGTAATCAGACAGGGTTTCTGCCATCCTTCCAGTTGTTTA 905955 Query 18902 CCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGT 18961 || ||| | || || | || || || || | ||| |||||||| ||| || | Sbjct 905954 CCAGCAAATATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATCTTGGCT 905895 Query 18962 TTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAA 19021 || || | ||| |||||| || ||| ||| | |||||||| || || || ||| Sbjct 905894 TTGACATTTTCGATAGTATCAGAAGCCTCTACTTCCAAAGTAATGGTCTTTCCAGTCAAA 905835 Query 19022 GTTTTGACAAAAATTTGCAT 19041 |||||||||||||||||||| Sbjct 905834 GTTTTGACAAAAATTTGCAT 905815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414541989208612