Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq335 105 6e-18
>seq335
Length=1594555
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
||||||| || | | |||| || | ||| ||||| |||||||| ||||| || |
Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906442
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| || | | ||||||||||||||||| ||| | || || | |||||| || ||
Sbjct 906441 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906382
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| ||| || || || |||||| || || | ||| ||| ||| || || |
Sbjct 906381 ATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGACT 906322
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042
|| | ||| ||||||||||| ||||| |||||||||||||| ||||||
Sbjct 906321 TCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872
||||||| || | | || |||| || | ||| ||||| |||||||| ||||| || |
Sbjct 906731 TTCCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTG 906672
Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932
| || | | ||||||||||||||||| ||| | || || | |||||| || |
Sbjct 906671 AAAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTG 906612
Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992
| | ||| || || || |||||| || || | ||| ||| ||| || ||
Sbjct 906611 GGATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAA 906552
Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||| | ||| ||||||||||| ||||| |||||||| ||||| |||||
Sbjct 906551 CTTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/200 (71%), Gaps = 3/200 (2%)
Strand=Plus/Minus
Query 18845 GTAGACTCCTTTTGA-ATATTGTAATCCGCCATTGTTT-TGGCGTCCT-CCAGCTGTTTA 18901
|| || || ||||| || |||||||| | || |||| || | |||| |||| ||||||
Sbjct 906014 GTTGATTCTTTTTGGGATGTTGTAATCAGACAGGGTTTCTGCCATCCTTCCAGTTGTTTA 905955
Query 18902 CCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGT 18961
|| ||| | || || | || || || || | ||| |||||||| ||| || |
Sbjct 905954 CCAGCAAATATGAGACGTTGTTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATCTTGGCT 905895
Query 18962 TTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAA 19021
|| || | ||| |||||| || ||| ||| | |||||||| || || || |||
Sbjct 905894 TTGACATTTTCGATAGTATCAGAAGCCTCTACTTCCAAAGTAATGGTCTTTCCAGTCAAA 905835
Query 19022 GTTTTGACAAAAATTTGCAT 19041
||||||||||||||||||||
Sbjct 905834 GTTTTGACAAAAATTTGCAT 905815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414541989208612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |