Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq158 91.5 1e-13
seq335 84.2 2e-11
>seq158
Length=288468
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| ||||| || || || |||||| || ||||| || ||| | ||| ||||
Sbjct 91913 TAAGACCAAGTGGAGAGTCGACTCTTTCTGGATATTGTAGTCGGAGAGCGTACGACCATC 91854
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
|||||||||||||| ||||| || || || |||||||| | || | || ||||| ||
Sbjct 91853 TTCCAATTGTTTTCCGGCAAAGATTAAACGCTGCTGGTCTGGCGGGATTCCCTCTTTGTC 91794
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
||||| ||||| | | | ||||| | | ||| || || | || || ||
Sbjct 91793 CTGGATTTTAGCCTTGACATTTTCGATCGTATCAGAGGCCTCGACTTCAAGTGTGATGGT 91734
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| ||||| ||||||||||| || || |||||
Sbjct 91733 TTTGCCGGTCAAAGTCTTCACGAAGATCTGCAT 91701
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||||||| | || ||||| || || || |||||||||||||| || |||
Sbjct 89647 CCTCCTCTCAAACGCAAGACCAAGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGAC 89588
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
| ||| |||| || | || || || || || ||||||| |||||||| | ||
Sbjct 89587 AGAGTACGTCCATCCTCGAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 89528
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| || ||||| ||| ||| || ||||| | ||| ||| || | | ||| ||
Sbjct 89527 ATGCCCTCTTTGTCTTGAATCTTGGCCTTGACATTCTCAATAGTGTCAGAAGCCTCAACC 89468
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
|| | || || || || ||||| || ||||| ||||| || ||||||
Sbjct 89467 TCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTAACAAAGATCTGCATG 89420
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
|| |||||||| || || || ||| || |||| || | ||| || || |||||
Sbjct 89839 TCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCAAAA 89780
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
|||| || ||||| || |||| | ||||||||| ||| |||||| ||||| |
Sbjct 89779 ATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTC 89720
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
||| ||||| | | || || || | ||||||||||| || || | ||||| |||
Sbjct 89719 TCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTTAACA 89660
Query 44111 AATATTTGCATG 44122
|| |||||||||
Sbjct 89659 AAAATTTGCATG 89648
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
|||||| | | || || |||| ||| |||||| ||||||||||| ||||| ||
Sbjct 90104 ACCTCCACGAAGTCGCAATACCAGATGCAGCGTGGATTCTTTTTGAATGTTATAGTCTGA 90045
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
||| || |||| || ||||||||||| || || ||||||| |||||||| | ||
Sbjct 90044 CAATGTGCGACCATCCTCTAATTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGTGG 89985
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| || ||||| || |||||| || || | | | || || | | ||| ||
Sbjct 89984 GATTCCCTCTTTGTCCTGAATTTTAGCCTTCACATTTTCGATCGTGTCGGAAGCCTCGAC 89925
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || |||||||| || | ||||| || || || |||||
Sbjct 89924 TTCAAGTGTGATGGTTTTACCCGTGAGTGTCTTAACGAAGATCTGCAT 89877
>seq335
Length=1594555
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
|||||||||| | | |||| ||| |||||| |||||||||||| || || || |
Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTC-TGA 906443
Query 43955 AATTGACGCT-CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | | | |||| |||| ||||| || ||||| || | || |||||||| | ||
Sbjct 906442 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906383
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||||| ||||| |||||| ||||| | | | ||| || | | || ||
Sbjct 906382 GATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGAC 906323
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || |||||||| ||||| || || ||||| || |||||
Sbjct 906322 TTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCAT 906275
Score = 82.4 bits (90), Expect = 5e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTC-ATC 43968
|| |||| ||| |||||| |||||||||||| || || || | || | | || |||
Sbjct 906714 AAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTC-TGAAAGGGTCCTTCCATC 906656
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
|||| ||||| || ||||| || | || |||||||| | || | ||||| |||||
Sbjct 906655 CTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTATC 906596
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
|||||| ||||| | | | ||| || | | || || || | || || ||
Sbjct 906595 CTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAACTTCTAAGGTGATGGT 906536
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
|||||||||||| || || || || || ||||||
Sbjct 906535 TTTACCGGTTAAGGTTTTGACGAAAATCTGCATG 906502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354751233150504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |