Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_005069.1
Length=46339
Score E
Sequences producing significant alignments: (Bits) Value
seq3602 168 2e-37
>seq3602
Length=1352
Score = 168 bits (186), Expect = 2e-37
Identities = 494/745 (66%), Gaps = 16/745 (2%)
Strand=Plus/Plus
Query 15404 TGCGACCCTTTCATGCTTGAAAAATGTCCGTCA-TGGAAAGAGGATATGATAGGTAAAGG 15462
||||| || | ||||| |||||||| || | |||||||||||||||||||| | ||
Sbjct 102 TGCGATCCGTATATGCT-GAAAAATGCCCCTAGCTGGAAAGAGGATATGATAGGGGATGG 160
Query 15463 GTTGGCATGGCTCAGAGTATCACTCAAGTTTAATGCAGAAAAATTCCCGTATGGCTTACC 15522
| || ||| | | || | || |||| | |||| |||||||||||||| || | ||
Sbjct 161 CCTCGCGTGGTTGCGCTTAACGCTAAAGTATGATGCTGAAAAATTCCCGTACGGTGTGCC 220
Query 15523 GAATATTAAAGCTGAGGTCTGGGGGAAAAAGTTGTATGACCCACGAACTGGTATGACTGA 15582
|||| | |||| || || |||||||| | | ||||| || || |||| || |
Sbjct 221 GAATGTCAAAGTCGAAGTATGGGGGAAGCAAATCTATGATCCGCGCACTGATAAAATCAT 280
Query 15583 GTGGAGCAATAATCTGGCTCTGGGCGTATTAGATTATTATCGCTCAGTGCTGAAG-GTTC 15641
||||||||||| || | | | | ||||| ||||| | | | ||| || |
Sbjct 281 TTGGAGCAATAACGGCGCGTTAGTTATTCTCGATTACTATCG-TAGCTATTTAAGTGTGC 339
Query 15642 CTGATACAGAAATTAATTGGGAACAATTTAAGGAAGCGGCAAATATTTGTGCTGAAC-TG 15700
| ||| | || ||| ||| || ||| || | || || || | || | ||||| ||
Sbjct 340 CCGATTCCGACATTGATTTTGATTCATTCAAAGTGGCTGCTGATTTATGCGATGAACCTG 399
Query 15701 ATAGTCAATCCTGAAGAGCAGTATGAAGCCCGTTATACAATGAATGGTAGCTT-TGATTT 15759
| | | ||||||| || ||| | || ||||| || || ||| |||| ||| |
Sbjct 400 TCACTACA-CCTGAAGGTGAGACTGAGCCTCGCTATACCATCAACGGT-GCTTATGAGCT 457
Query 15760 ATCAGAAACCCCCTCATCATTATTAGAGTCTATGCATTTATGCTGTGCGGGTGAACCGAC 15819
|| ||| | || |||| || | || ||||| |||| || | |||||||||
Sbjct 458 TTCCGAATCGCCAGCATCGATACTTGACCACATGCACAAATGCATAGCTGCTGAACCGAC 517
Query 15820 TTATATTGCTGGCCAGCATGGAATACTGGTTGGCGCTTATTATGGCCCTCCACAATTAAC 15879
|||| | || ||| | |||||||| || | || ||| |||| ||| | ||| ||
Sbjct 518 TTATGTAGCGGGCAAACATGGAATTTTGATGCAAGCCTATAATGGTCCTGCGGTATT-AC 576
Query 15880 GTTAAATGAAC---ATCAAATGGCCGATTCCGTTCAAATCACAACGGAAACTTCGATGCG 15936
| | ||||| |||||| |||| | || | ||||| | ||| | || | ||
Sbjct 577 G--CATTGAACCCAGTCAAATCATCGATACTGTGAACATCACGCCAGAACTTGCGCTACG 634
Query 15937 TGATGCGACCAATGCCATTTATGGGACTTTCGTTGACTGGGAGCAGCAATCTACCAAGAT 15996
|||||||| ||||| ||||| || || |||||||| |||||||| | | || |
Sbjct 635 CGATGCGACAAATGCAATTTACGGCACATTCGTTGATGCAGAGCAGCAGTACATTAAAAC 694
Query 15997 TGATTTTACTCCAGTTCGCGTGAATGAATGGATTGTCGAAGATGGCTTAGAAATTAAAGA 16056
|||||| || ||| || |||||||| ||| || ||||| |||||||| |||||
Sbjct 695 CGATTTTGAGCCGGTTATTGTTGATGAATGGGTTGATGAGGATGGATTAGAAATCAAAGA 754
Query 16057 AGATGTTGATCTTCGTTTTATTGATACGCCTTATCAAGCTCAGAGAGTCGCCAATATTCT 16116
| || | ||| || ||| || | || ||||| || || | |||||| |||
Sbjct 755 AAATATGGATTACCGCTTTGTTAGCAGTCCATATCAGGCGGCACGATTAGCCAAT-CTCT 813
Query 16117 A-TTACGTCGTAAACGTGCAGGTCG 16140
| ||||| ||||| ||||| ||
Sbjct 814 ATTTACGCAAAAAACGCGCAGGCCG 838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148152470947076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |