Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq3602 168 2e-37 >seq3602 Length=1352 Score = 168 bits (186), Expect = 2e-37 Identities = 494/745 (66%), Gaps = 16/745 (2%) Strand=Plus/Plus Query 15404 TGCGACCCTTTCATGCTTGAAAAATGTCCGTCA-TGGAAAGAGGATATGATAGGTAAAGG 15462 ||||| || | ||||| |||||||| || | |||||||||||||||||||| | || Sbjct 102 TGCGATCCGTATATGCT-GAAAAATGCCCCTAGCTGGAAAGAGGATATGATAGGGGATGG 160 Query 15463 GTTGGCATGGCTCAGAGTATCACTCAAGTTTAATGCAGAAAAATTCCCGTATGGCTTACC 15522 | || ||| | | || | || |||| | |||| |||||||||||||| || | || Sbjct 161 CCTCGCGTGGTTGCGCTTAACGCTAAAGTATGATGCTGAAAAATTCCCGTACGGTGTGCC 220 Query 15523 GAATATTAAAGCTGAGGTCTGGGGGAAAAAGTTGTATGACCCACGAACTGGTATGACTGA 15582 |||| | |||| || || |||||||| | | ||||| || || |||| || | Sbjct 221 GAATGTCAAAGTCGAAGTATGGGGGAAGCAAATCTATGATCCGCGCACTGATAAAATCAT 280 Query 15583 GTGGAGCAATAATCTGGCTCTGGGCGTATTAGATTATTATCGCTCAGTGCTGAAG-GTTC 15641 ||||||||||| || | | | | ||||| ||||| | | | ||| || | Sbjct 281 TTGGAGCAATAACGGCGCGTTAGTTATTCTCGATTACTATCG-TAGCTATTTAAGTGTGC 339 Query 15642 CTGATACAGAAATTAATTGGGAACAATTTAAGGAAGCGGCAAATATTTGTGCTGAAC-TG 15700 | ||| | || ||| ||| || ||| || | || || || | || | ||||| || Sbjct 340 CCGATTCCGACATTGATTTTGATTCATTCAAAGTGGCTGCTGATTTATGCGATGAACCTG 399 Query 15701 ATAGTCAATCCTGAAGAGCAGTATGAAGCCCGTTATACAATGAATGGTAGCTT-TGATTT 15759 | | | ||||||| || ||| | || ||||| || || ||| |||| ||| | Sbjct 400 TCACTACA-CCTGAAGGTGAGACTGAGCCTCGCTATACCATCAACGGT-GCTTATGAGCT 457 Query 15760 ATCAGAAACCCCCTCATCATTATTAGAGTCTATGCATTTATGCTGTGCGGGTGAACCGAC 15819 || ||| | || |||| || | || ||||| |||| || | ||||||||| Sbjct 458 TTCCGAATCGCCAGCATCGATACTTGACCACATGCACAAATGCATAGCTGCTGAACCGAC 517 Query 15820 TTATATTGCTGGCCAGCATGGAATACTGGTTGGCGCTTATTATGGCCCTCCACAATTAAC 15879 |||| | || ||| | |||||||| || | || ||| |||| ||| | ||| || Sbjct 518 TTATGTAGCGGGCAAACATGGAATTTTGATGCAAGCCTATAATGGTCCTGCGGTATT-AC 576 Query 15880 GTTAAATGAAC---ATCAAATGGCCGATTCCGTTCAAATCACAACGGAAACTTCGATGCG 15936 | | ||||| |||||| |||| | || | ||||| | ||| | || | || Sbjct 577 G--CATTGAACCCAGTCAAATCATCGATACTGTGAACATCACGCCAGAACTTGCGCTACG 634 Query 15937 TGATGCGACCAATGCCATTTATGGGACTTTCGTTGACTGGGAGCAGCAATCTACCAAGAT 15996 |||||||| ||||| ||||| || || |||||||| |||||||| | | || | Sbjct 635 CGATGCGACAAATGCAATTTACGGCACATTCGTTGATGCAGAGCAGCAGTACATTAAAAC 694 Query 15997 TGATTTTACTCCAGTTCGCGTGAATGAATGGATTGTCGAAGATGGCTTAGAAATTAAAGA 16056 |||||| || ||| || |||||||| ||| || ||||| |||||||| ||||| Sbjct 695 CGATTTTGAGCCGGTTATTGTTGATGAATGGGTTGATGAGGATGGATTAGAAATCAAAGA 754 Query 16057 AGATGTTGATCTTCGTTTTATTGATACGCCTTATCAAGCTCAGAGAGTCGCCAATATTCT 16116 | || | ||| || ||| || | || ||||| || || | |||||| ||| Sbjct 755 AAATATGGATTACCGCTTTGTTAGCAGTCCATATCAGGCGGCACGATTAGCCAAT-CTCT 813 Query 16117 A-TTACGTCGTAAACGTGCAGGTCG 16140 | ||||| ||||| ||||| || Sbjct 814 ATTTACGCAAAAAACGCGCAGGCCG 838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148152470947076