Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq236 111 1e-19 >seq236 Length=27037145 Score = 111 bits (122), Expect = 1e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 25789 GCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGC 25848 |||||||||| |||||||||||| || || || || || | ||| || ||||| || | Sbjct 26890850 GCTCCGAAATGCCTCCACTGGAAGCCATATACAGGGCCCAAGTCGCCCTCTTCTCTATCG 26890791 Query 25849 TCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCC 25908 || || | ||||||||| || | |||| |||||||| |||||| ||||| || Sbjct 26890790 GTGAACCCGCAGGAATCCAAAAATTCACGCGAACTATTGGCGTTCCAGATTTTTACGCCT 26890731 Query 25909 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 || |||| |||||||| | ||| ||||| || | | |||||| |||| |||| Sbjct 26890730 TTGTCGGCAAGCTCTTTTGCGTTAGTGGATCCCTTTATGAACCAGAGCAACTCC 26890677 Score = 102 bits (112), Expect = 6e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| ||||| || || || | ||||||||| || ||||| ||||| || || || Sbjct 25468359 CATGTCGACGTACTTGGCGCCAAAGTGCCTCCACTGAAAGCCGTAAACCGGGCCGAGATC 25468418 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || || | | || |||||| | | || | || |||||||| | |||||||| Sbjct 25468419 GCCTTCCTCGCGATCCTGAAAGCCGCAGGTGTCGAGGAATTCTCTGGACGCGTTGGCGTC 25468478 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 25952 |||||| || || || || | || ||||| |||| ||| || || |||| || |||||| Sbjct 25468479 CCAGATTTTCACGCCTTTGGCCGAAAGCTCCTTGGCGTTAGTCGAGCCTCGGATGAACCA 25468538 Query 25953 CAGCAGCTC 25961 | || ||| Sbjct 25468539 GAACAACTC 25468547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340112321186154