Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq335 93.3 4e-14
seq158 91.5 1e-13
>seq335
Length=1594555
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|||||||| | | || || | |||||| ||| ||| |||||||||||||| || |
Sbjct 906729 CCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA- 906671
Query 48560 AATTGTCGCTCG-TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| ||| || ||||||||||| |||||| | | || | ||||||||| || ||
Sbjct 906670 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906611
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||| ||| |||||| ||||| | || || |||| || ||
Sbjct 906610 GATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906551
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || |||||||||||||| | ||||| || |||||||||||
Sbjct 906550 TTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCAT 906503
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCTCCAGCT 48581
||| || ||| ||| |||||||||||||| || | || ||| || ||||||||||
Sbjct 906478 ATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA-AAGGGTCCTTCCATCCTCCAGCT 906420
Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641
| |||||| | | || | ||||||||| || || | | |||||| ||| |||||
Sbjct 906419 GTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGAATTT 906360
Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCT-CGACTGTTATGGTTTTACCG 48700
| ||||| | || || |||| || || || || | | ||||||||||||||
Sbjct 906359 TAGCCTTGACGTTTTCGATAGTGTCGGAAG-CTTCGACTTCTAAGGTTATGGTTTTACCA 906301
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||||| ||||||||||||||
Sbjct 906300 GTTAAGGTTTTGACAAAAATCTGCAT 906275
>seq158
Length=288468
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
||||||||| ||||||||||||||||| |||| |||| || | || || || |||
Sbjct 89851 TGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGC 89792
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
||||| | |||| | | ||||||||| || | || ||| ||||| ||||||
Sbjct 89791 TTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTTA 89732
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGT 48702
||||| | | | || ||||| | || || || | || | || || ||||| || ||
Sbjct 89731 GCCTTGACATTCTCAATCGTATCAGAAG-CTTCGACTTCCAGAGTAATTGTTTTGCCAGT 89673
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
|| || || |||||||| |||||
Sbjct 89672 AAGCGTCTTAACAAAAATTTGCAT 89649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421219892874098
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |