Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=33571687 Score = 107 bits (118), Expect = 2e-18 Identities = 209/304 (69%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 164410 ATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGAGCATTTGCTTCT 164469 |||||| | ||||| | ||| |||||| | |||||||||| |||||||||| || Sbjct 14822123 ATGGGAATTGGTGGTTTGGATAAAGAATTCAGTGCTATTTTCAGAAGAGCATTTGCATCA 14822182 Query 164470 AGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATAAAAGGAATTTTA 164529 | | ||||| ||| || | | | ||||||| |||||||| | ||||| || || Sbjct 14822183 CGGGTATTTCCTCCAGAAGTAGTTATACAATTAGGATGTAAACACGTTAAAGGTATCTTG 14822242 Query 164530 TTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTT 164589 | |||| || |||||| |||||||| | |||||| | |||| | || | || Sbjct 14822243 CTTTATGGGCCACCTGGTACAGGTAAAACGCTTATGGCTAGGCAAATTGGT-AACATGTT 14822301 Query 164590 AAATC---GCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGT 164646 ||| | || || |||||||| ||||| || || | || | |||||||| ||| Sbjct 14822302 GAATGCAAGAGAACCC--AAAATTGTCAATGGCCCACAAATCTTAGATAAATATGTTGGT 14822359 Query 164647 GAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA--ACAAAAGA--A 164702 ||| ||||| ||| | ||| ||||| || ||||||||||| | |||||| | Sbjct 14822360 GAGAGTGAAGCCAATATCCGAAGACTGTTTGCTGATGCTGAAGAAGAGGAAAAAAGAGTA 14822419 Query 164703 AGCA 164706 |||| Sbjct 14822420 AGCA 14822423 Score = 93.3 bits (102), Expect = 5e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 164785 CATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAAT 164844 || ||| | || || |||||| | ||| | ||||| |||||||| ||| ||||| ||| Sbjct 14822581 CACGATACCGTAGTAAATCAGCTACTTGCCAAAATTGATGGTGTGGAACAATTAAACAAT 14822640 Query 164845 ATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCT 164904 || || || | |||||||||||| ||| || | ||||| || ||||| | |||||| Sbjct 14822641 ATACTAGTTATCGGTATGACCAACAGACGGGACATGATTGACGAGGCTTTGCTCCGACCT 14822700 Query 164905 GGTCGATTAGA 164915 ||| ||||||| Sbjct 14822701 GGTAGATTAGA 14822711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595826579656800