Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_006645.1 Length=21388 Score E Sequences producing significant alignments: (Bits) Value seq512 104 3e-18 seq300 104 3e-18 seq290 102 1e-17 seq314 98.7 1e-16 seq407 95.1 2e-15 seq404 87.8 2e-13 seq152 86.0 9e-13 seq391 84.2 3e-12 seq1371 82.4 1e-11 seq982 82.4 1e-11 seq409 82.4 1e-11 seq403 82.4 1e-11 seq807 80.6 4e-11 seq520 80.6 4e-11 >seq512 Length=83436 Score = 104 bits (114), Expect = 3e-18 Identities = 110/140 (79%), Gaps = 10/140 (7%) Strand=Plus/Minus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGT-TGAGATTCCTGCACTGCGGG-CATCATG 496 ||||||||||||| ||||||| |||||||| || |||||||||||||| | || ||| Sbjct 77727 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACACGATG 77668 Query 497 GC----ACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTG 552 | ||| | || | || ||| ||||||||||||| | |||||||||||||||| Sbjct 77667 CCCGAGACGAA--TCCG--CTTCCAACTTTCTGCCCATGTGGCGTATACTATTTTTCTTT 77612 Query 553 CTATGCGGTCGAAAGTACGT 572 || ||||||||||||||| Sbjct 77611 ATACCCGGTCGAAAGTACGT 77592 >seq300 Length=762213 Score = 104 bits (114), Expect = 3e-18 Identities = 108/140 (77%), Gaps = 5/140 (4%) Strand=Plus/Plus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGG---CAT--C 493 ||||||||||||| ||||||| |||||||| | |||||||||||||| || | Sbjct 628054 AATAGTATATTACGCTACAAGGGCAGAAAGGCGGAATTCCTGCACTGCGCAGTACAGTAC 628113 Query 494 ATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGC 553 || | |||||| |||| || ||| ||| || |||||| | ||||||||||||||| Sbjct 628114 ATATCGCGCAGTACAGGTCTTCCAACTTTTTGTCCATGTGGCTTATACTATTTTTCTTTA 628173 Query 554 TATGCGGTCGAAAGTACGTT 573 || ||||||||||| |||| Sbjct 628174 TACCCGGTCGAAAGTCCGTT 628193 Score = 96.9 bits (106), Expect = 5e-16 Identities = 113/154 (73%), Gaps = 18/154 (12%) Strand=Plus/Plus Query 438 CAATAGTATATTACACTACAAGAGCAGAAAGT-TGAGATTCCTGCACTGCGGG-CATCAT 495 |||||||||||||| ||||||| ||||||| || ||||||||||||| | ||| || Sbjct 739342 CAATAGTATATTACGCTACAAGGACAGAAAGGCTGGAATTCCTGCACTGCACGACATGAT 739401 Query 496 GGCA----------------CGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTAT 539 | | |||||| ||||||| ||| ||| | ||||||| | |||| Sbjct 739402 GCCCGAGGCGAAGCCGATCGCGCAGTACAGGGCTTCCAACTTTTTACCCATGTGGCGTAT 739461 Query 540 ACTATTTTTCTTGCTATGCGGTCGAAAGTACGTT 573 |||||||||||| || |||||||||||||||| Sbjct 739462 ACTATTTTTCTTTATACCCGGTCGAAAGTACGTT 739495 Score = 86.0 bits (94), Expect = 9e-13 Identities = 66/75 (88%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 596 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654 |||||||| |||||||||||| | |||||||||||||||||||||| |||| |||||| Sbjct 739677 GATGCCTG-CCCCGACATTTGCCAGCACGAGCGAAGCGAGTGCTGCGGGTC---GGGGGC 739732 Query 655 AGGCATCAAATACAC 669 ||||||| || |||| Sbjct 739733 AGGCATCGAAAACAC 739747 >seq290 Length=802719 Score = 102 bits (112), Expect = 1e-17 Identities = 108/143 (76%), Gaps = 16/143 (11%) Strand=Plus/Minus Query 440 ATAGTATATTACACTACAAGAGCAGAAAGTTGAG-ATTCCTGCACTGCGGGCATCATGGC 498 |||||||||||| ||||||| |||| ||| || |||||||||||||| Sbjct 362272 ATAGTATATTACGCTACAAGGGCAGGAAGGCTAGGATTCCTGCACTGCG----------- 362224 Query 499 ACGCAGTTCAGGGCT-CTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTATG 557 ||||||| |||| || || |||||||||||| |||||||||||||||| || Sbjct 362223 ---CAGTTCATGGCTTCTAGCCTTCCTGCCCATGTAGCGTATACTATTTTTCTTTATAGC 362167 Query 558 CGGTCGAAAGTACGTTAAAAATT 580 |||||||||||||||| | |||| Sbjct 362166 CGGTCGAAAGTACGTTTATAATT 362144 Score = 91.5 bits (100), Expect = 2e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 596 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggg 653 |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 362048 GATGTCTGCCCCCGACATTTCCAGCACGAGCGAAGCGAGTGCTGCTGGTCGGGGGGGG 361991 >seq314 Length=14808294 Score = 98.7 bits (108), Expect = 1e-16 Identities = 64/69 (93%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 596 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggCA 655 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| Sbjct 11877400 GATGCCTGCCCCCGACATTTGCAGCACGAGCGAAGCGAGTGCTGCTGGTC-GGGTGGGCA 11877458 Query 656 GGCATCAAA 664 | |||| || Sbjct 11877459 GACATCGAA 11877467 Score = 84.2 bits (92), Expect = 3e-12 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 496 GGCACGCAGTTCAGGGCT-CTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCT 554 |||| | ||||||||||| || || |||||||||||| |||||||||||||||| | Sbjct 11877219 GGCAGGAAGTTCAGGGCTTCTAGCCTTCCTGCCCATGTAGCGTATACTATTTTTCTTTAT 11877278 Query 555 ATGCGGTCGAAAGTACGTTAAAAATT 580 | |||||||||||||||| | |||| Sbjct 11877279 AGCCGGTCGAAAGTACGTTTATAATT 11877304 >seq407 Length=407263 Score = 95.1 bits (104), Expect = 2e-15 Identities = 119/164 (73%), Gaps = 22/164 (13%) Strand=Plus/Plus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAG-ATTCCTGCACTGCGGGC-ATCATG 496 ||||||||||||| ||||||| |||| ||| || |||||||||||||| | || ||| Sbjct 338662 AATAGTATATTACGCTACAAGGGCAGGAAGGCTAGGATTCCTGCACTGCGCGATATAATG 338721 Query 497 GCA-------------------CGCAGTTCAGGGCT-CTCAAATTTCTGCCCATGTAGTG 536 | ||||||| |||||| || || |||||||||||||| Sbjct 338722 CCCTCGGCTTCGCCTTCATTCGCGCAGTTTAGGGCTTCTAGCCTTCCTGCCCATGTAGTG 338781 Query 537 TATACTATTTTTCTTGCTATGCGGTCGAAAGTACGTTAAAAATT 580 ||||||||||||||| || |||||||||||||||| | |||| Sbjct 338782 TATACTATTTTTCTTTATAGCCGGTCGAAAGTACGTTTATAATT 338825 >seq404 Length=584908 Score = 87.8 bits (96), Expect = 2e-13 Identities = 67/76 (88%), Gaps = 5/76 (7%) Strand=Plus/Plus Query 595 TGATGCCTGCCCCCGACATTT-GCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggg 653 ||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||| Sbjct 199568 TGATGCCTG-CCCCGACATTTCCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GGGGG 199623 Query 654 CAGGCATCAAATACAC 669 |||||||| || |||| Sbjct 199624 CAGGCATCGAAAACAC 199639 Score = 84.2 bits (92), Expect = 3e-12 Identities = 108/146 (74%), Gaps = 11/146 (8%) Strand=Plus/Plus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGA-TTCCTGCACTGCGGG-CATCATG 496 ||||||||||||| |||||| || ||||| | | || |||||||||| | ||| ||| Sbjct 199268 AATAGTATATTACGCTACAAAGGCTGAAAGACTACAATTTCTGCACTGCGCGACATGATG 199327 Query 497 GC-------ACGC--AGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTT 547 | | || ||| ||||||| ||| ||| ||||||||| | |||||||||||| Sbjct 199328 CCCGAGGCGAAGCCAAGTACAGGGCTTCCAACTTTTTGCCCATGTGGCGTATACTATTTT 199387 Query 548 TCTTGCTATGCGGTCGAAAGTACGTT 573 |||| || || | |||||||||| Sbjct 199388 TCTTTATACCCGTTTAAAAGTACGTT 199413 >seq152 Length=2703334 Score = 86.0 bits (94), Expect = 9e-13 Identities = 67/76 (88%), Gaps = 7/76 (9%) Strand=Plus/Plus Query 596 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654 |||||||| |||||||||||| | |||||||| |||||||||||||||||| |||||| Sbjct 878893 GATGCCTG-CCCCGACATTTGCCAGCACGAGCAAAGCGAGTGCTGCTGGTC---GGGGGC 878948 Query 655 AGGCATC--AAATACA 668 ||||||| ||||||| Sbjct 878949 AGGCATCGAAAATACA 878964 >seq391 Length=945936 Score = 84.2 bits (92), Expect = 3e-12 Identities = 77/95 (81%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 487 GGGCATCATGGCACGCAGTTCAGGGCT-CTCAAATTTCTGCCCATGTAGTGTATACTATT 545 ||||||||| | |||| ||||||||| || || |||||||||||| |||||||||| Sbjct 322055 GGGCATCATT-CGCGCATTTCAGGGCTTCTAGCCTTCCTGCCCATGTAGCGTATACTATT 321997 Query 546 TTTCTTGCTATGCGGTCGAAAGTACGTTAAAAATT 580 |||||| || | |||||||||||||| | |||| Sbjct 321996 TTTCTTTATAGCCAGTCGAAAGTACGTTTATAATT 321962 >seq1371 Length=14516 Score = 82.4 bits (90), Expect = 1e-11 Identities = 67/78 (86%), Gaps = 5/78 (6%) Strand=Plus/Plus Query 596 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654 |||||||| |||||||||||| | ||||||||||||| |||||||||||| |||||| Sbjct 4335 GATGCCTG-CCCCGACATTTGCCAGCACGAGCGAAGCTTGTGCTGCTGGTC---GGGGGC 4390 Query 655 AGGCATCAAATACACCTG 672 ||||||| || |||| || Sbjct 4391 AGGCATCGAAAACACATG 4408 >seq982 Length=11270 Score = 82.4 bits (90), Expect = 1e-11 Identities = 65/75 (87%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 596 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654 ||||||||| || ||||||||| ||||||||||||||||||||||||||| | |||| Sbjct 8292 GATGCCTGCTCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GTGGGC 8347 Query 655 AGGCATCAAATACAC 669 ||||||| || |||| Sbjct 8348 AGGCATCGAAAACAC 8362 >seq409 Length=1876529 Score = 82.4 bits (90), Expect = 1e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 596 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggg 653 |||| ||||||||||||||| | |||| |||||| ||||||||||||||||||||||| Sbjct 28551 GATGTCTGCCCCCGACATTTTCAGCACAAGCGAAACGAGTGCTGCTGGTCGGGGGGGG 28494 >seq403 Length=594701 Score = 82.4 bits (90), Expect = 1e-11 Identities = 69/80 (86%), Gaps = 6/80 (8%) Strand=Plus/Minus Query 592 AATT-GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCgggg 649 |||| |||||||| ||| ||||||||| ||||||||||||||||||||||||||| | Sbjct 183189 AATTCGATGCCTGACCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---G 183134 Query 650 ggggCAGGCATCAAATACAC 669 ||| |||||||| || |||| Sbjct 183133 GGGACAGGCATCGAAAACAC 183114 >seq807 Length=36833 Score = 80.6 bits (88), Expect = 4e-11 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 596 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGT 644 |||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 17647 GATGTCTGCCCCCGACATTTGCAGCACGAGCGAAGCGAGTGCTGCTGGT 17695 >seq520 Length=153618 Score = 80.6 bits (88), Expect = 4e-11 Identities = 77/94 (82%), Gaps = 6/94 (6%) Strand=Plus/Minus Query 605 CCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggCAGGCATCAA 663 ||||||||||||| | |||||||||||| |||||||||||| |||||||||||||| | Sbjct 6569 CCCCGACATTTGCCAGAACGAGCGAAGCGTGTGCTGCTGGTC--GGGGGGCAGGCATCGA 6512 Query 664 ATACACCTGTCAATAA--AGATATTAATATATAA 695 | |||| || ||| || | |||| || | |||| Sbjct 6511 AAACACATG-CAAAAATCAAATATAAAGAAATAA 6479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 68318382659274