Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_006649.1 Length=32108 Score E Sequences producing significant alignments: (Bits) Value seq351 232 1e-56 seq414 197 3e-46 seq1380 194 3e-45 seq1359 194 3e-45 seq343 143 5e-30 seq61 98.7 2e-16 seq753 82.4 2e-11 seq314 82.4 2e-11 >seq351 Length=400098 Score = 232 bits (256), Expect = 1e-56 Identities = 186/223 (83%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770 |||||| || |||||||| |||||||||||||| ||| |||| ||| ||||| ||||||| Sbjct 39504 ATAGTAGATCACATACCTCGGCCAGTAAAATAAGAAATGTCTGAGATCACATATAATTGT 39445 Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTT-ACTGGC 829 | | |||| ||||||||||| | ||||||||||||||| |||| ||||| |||||| Sbjct 39444 CGGTCAAGGCAAAGCCAAGGTTAATGAACATGTGATCTGAGACTTTCTTTTTTTACTGGC 39385 Query 830 CAAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCG 889 | || ||||||| ||||||||||||||||||| |||||| ||||||| | |||| | Sbjct 39384 CTAGATGTGTATTCTATTTTTCTGCTCGACGTCACCGGAAAGTGGCAATATCGTTTTATG 39325 Query 890 CAGCGGCCAGAAAGTTGTCACTTTCCGGCCGGAGGGCAGAAAA 932 ||||||||||||||||| | ||| |||| ||||||| |||||| Sbjct 39324 CAGCGGCCAGAAAGTTGGCGCTTCCCGGACGGAGGGAAGAAAA 39282 >seq414 Length=4040552 Score = 197 bits (218), Expect = 3e-46 Identities = 170/210 (81%), Gaps = 13/210 (6%) Strand=Plus/Minus Query 713 AGTATATTACATACCTA--GGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770 |||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||| Sbjct 105992 AGTAGATTACATACCTATAGACCAGTAAAATAATAAATGTCTCAGAACACGTGTAATTGT 105933 Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGCC 830 | | ||||| ||| ||||| ||||||||| |||| |||||||||||| Sbjct 105932 CG-----GTCGAAGTCAAT------AAACAGATGATCTGAGCCTTTCTTTTTTACTGGCC 105884 Query 831 AAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCGC 890 ||||| |||| || ||||||| ||||||| ||||||| | |||||||| |||| ||| Sbjct 105883 CAGGTGCGTATCCTGTTTTTCTCCTCGACGGTGCCGGAAAGCGGCAACTTCGTTTCACGC 105824 Query 891 AGCGGCCAGAAAGTTGTCACTTTCCGGCCG 920 |||||||||||||||| | ||||||||||| Sbjct 105823 AGCGGCCAGAAAGTTGGCGCTTTCCGGCCG 105794 >seq1380 Length=11128 Score = 194 bits (214), Expect = 3e-45 Identities = 177/222 (80%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770 |||||| ||||||||| |||||||||||||||| ||| | |||||| ||||| ||||||| Sbjct 1878 ATAGTAGATTACATACGTAGGCCAGTAAAATAAGAAATGCCTCAGATCACATTTAATTGT 1819 Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGCC 830 | |||| | |||| |||| | ||||||||||||||||||||| ||||||| ||| Sbjct 1818 CGGTCGAGTCAAAGCTGAGGTCAATAAACATGTGATCTGAGGCTTTGTTTTTTAC-AGCC 1760 Query 831 AAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCGC 890 ||||||||||| || || | ||||||||| ||||||| | || || || |||| |||| Sbjct 1759 CAGGTGTGTATATTACTTGTTTGCTCGACGGTGCCGGAAAGCGGTAAGTTCGTTTCGCGC 1700 Query 891 AGCGGCCAGAAAGTTGTCACTTTCCGGCCGGAGGGCAGAAAA 932 |||||||||||| || | ||| | |||||||| |||| Sbjct 1699 AGCGGCCAGAAACTTTAAGCAATCCAACTGGAGGGCACAAAA 1658 >seq1359 Length=145664 Score = 194 bits (214), Expect = 3e-45 Identities = 177/222 (80%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770 |||||| ||||||||| |||||||||||||||| ||| | |||||| ||||| ||||||| Sbjct 140029 ATAGTAGATTACATACGTAGGCCAGTAAAATAAGAAATGCCTCAGATCACATTTAATTGT 140088 Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGCC 830 | |||| | |||| |||| | ||||||||||||||||||||| ||||||| ||| Sbjct 140089 CGGTCGAGTCAAAGCTGAGGTCAATAAACATGTGATCTGAGGCTTTGTTTTTTAC-AGCC 140147 Query 831 AAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCGC 890 ||||||||||| || || | ||||||||| ||||||| | || || || |||| |||| Sbjct 140148 CAGGTGTGTATATTACTTGTTTGCTCGACGGTGCCGGAAAGCGGTAAGTTCGTTTCGCGC 140207 Query 891 AGCGGCCAGAAAGTTGTCACTTTCCGGCCGGAGGGCAGAAAA 932 |||||||||||| || | ||| | |||||||| |||| Sbjct 140208 AGCGGCCAGAAACTTTAAGCAATCCAACTGGAGGGCACAAAA 140249 >seq343 Length=328406 Score = 143 bits (158), Expect = 5e-30 Identities = 118/144 (82%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 792 TGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGCCAAGGTGTGTATACTATTTTTC 851 ||| || |||||||||||||||||| ||||| ||||| ||| ||||||||| | ||| Sbjct 62758 TGATAATCATGTGATCTGAGGCTTTCTTTTTTTCTGGCTCAGGCGTGTATACTGCTGTTC 62817 Query 852 TGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCGCAGCGGCCAGAAAGTTGTCACT 911 |||||| || | ||||| | |||||||| |||| ||||||||||| ||| ||| | || Sbjct 62818 TGCTCGGCGGTGACGGAAGGCGGCAACTTCGTTTCGCGCAGCGGCCGGAATGTTTGCGCT 62877 Query 912 TTCCGGCCGGAGGGCAGAAAATGT 935 |||||||||||||||| || |||| Sbjct 62878 TTCCGGCCGGAGGGCATAACATGT 62901 >seq61 Length=338657 Score = 98.7 bits (108), Expect = 2e-16 Identities = 102/131 (78%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGT-AATTG 769 |||||||||||| |||||||||| | |||||| || ||| |||| | ||||| |||| Sbjct 12966 ATAGTATATTACGTACCTAGGCCGGGAAAATATAGAATGTCCCAGATCGCATGTGTATTG 13025 Query 770 TTGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGC 829 | ||||||||||||| ||| || |||||||| ||||||| || || || || | ||| Sbjct 13026 CCGCCCGAGGCGAAGCCGAGGGTGGCAAACATGCGATCTGA-GCATTCTTTGTTCCCGGC 13084 Query 830 CAAGGTGTGTA 840 | |||| ||| Sbjct 13085 CGTGGTGCGTA 13095 >seq753 Length=34035 Score = 82.4 bits (90), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 8/129 (6%) Strand=Plus/Minus Query 805 ATCTGAGGCTTTACTTTTTACTGGCCAAGGTGTGTATACTATTTTTCTGCTCGACGTAGC 864 || || |||||| || ||| || || ||||||||||||| |||||||||| | || Sbjct 28848 ATGTGGGGCTTTTTTTATTAATG---AAATTGTGTATACTATTCTTCTGCTCGATGACGC 28792 Query 865 CGGAATGTGGCAACTTTGTTTAGCGCAGCGGCCAGAAAGTTGTCACTTTCCGGCCGGAGG 924 | ||| | |||| ||| || | |||| |||||||||||||||||||| ||| Sbjct 28791 CAGAAAGCGGCAT-----TTTCACGTGGTAGCCATAAAGTTGTCACTTTCCGGCCAGAGT 28737 Query 925 GCAGAAAAT 933 ||||||||| Sbjct 28736 GCAGAAAAT 28728 >seq314 Length=14808294 Score = 82.4 bits (90), Expect = 2e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770 ||||||||||||||||||||||| | ||||||| || ||| |||| | ||| | | Sbjct 7651633 ATAGTATATTACATACCTAGGCCGGGAAAATAAAGAATGTCCCAGATCGCATTTGTATTC 7651692 Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGA 810 | || |||||||||| || || |||||||| ||||||| Sbjct 7651693 CGCCCTAGGCGAAGCCGAGAGTGGCAAACATGCGATCTGA 7651732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102616568611320