Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_006649.1
Length=32108
Score E
Sequences producing significant alignments: (Bits) Value
seq351 232 1e-56
seq414 197 3e-46
seq1380 194 3e-45
seq1359 194 3e-45
seq343 143 5e-30
seq61 98.7 2e-16
seq753 82.4 2e-11
seq314 82.4 2e-11
>seq351
Length=400098
Score = 232 bits (256), Expect = 1e-56
Identities = 186/223 (83%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770
|||||| || |||||||| |||||||||||||| ||| |||| ||| ||||| |||||||
Sbjct 39504 ATAGTAGATCACATACCTCGGCCAGTAAAATAAGAAATGTCTGAGATCACATATAATTGT 39445
Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTT-ACTGGC 829
| | |||| ||||||||||| | ||||||||||||||| |||| ||||| ||||||
Sbjct 39444 CGGTCAAGGCAAAGCCAAGGTTAATGAACATGTGATCTGAGACTTTCTTTTTTTACTGGC 39385
Query 830 CAAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCG 889
| || ||||||| ||||||||||||||||||| |||||| ||||||| | |||| |
Sbjct 39384 CTAGATGTGTATTCTATTTTTCTGCTCGACGTCACCGGAAAGTGGCAATATCGTTTTATG 39325
Query 890 CAGCGGCCAGAAAGTTGTCACTTTCCGGCCGGAGGGCAGAAAA 932
||||||||||||||||| | ||| |||| ||||||| ||||||
Sbjct 39324 CAGCGGCCAGAAAGTTGGCGCTTCCCGGACGGAGGGAAGAAAA 39282
>seq414
Length=4040552
Score = 197 bits (218), Expect = 3e-46
Identities = 170/210 (81%), Gaps = 13/210 (6%)
Strand=Plus/Minus
Query 713 AGTATATTACATACCTA--GGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770
|||| |||||||||||| | |||||||||||||||| |||||||||||| |||||||||
Sbjct 105992 AGTAGATTACATACCTATAGACCAGTAAAATAATAAATGTCTCAGAACACGTGTAATTGT 105933
Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGCC 830
| | ||||| ||| ||||| ||||||||| |||| ||||||||||||
Sbjct 105932 CG-----GTCGAAGTCAAT------AAACAGATGATCTGAGCCTTTCTTTTTTACTGGCC 105884
Query 831 AAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCGC 890
||||| |||| || ||||||| ||||||| ||||||| | |||||||| |||| |||
Sbjct 105883 CAGGTGCGTATCCTGTTTTTCTCCTCGACGGTGCCGGAAAGCGGCAACTTCGTTTCACGC 105824
Query 891 AGCGGCCAGAAAGTTGTCACTTTCCGGCCG 920
|||||||||||||||| | |||||||||||
Sbjct 105823 AGCGGCCAGAAAGTTGGCGCTTTCCGGCCG 105794
>seq1380
Length=11128
Score = 194 bits (214), Expect = 3e-45
Identities = 177/222 (80%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770
|||||| ||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct 1878 ATAGTAGATTACATACGTAGGCCAGTAAAATAAGAAATGCCTCAGATCACATTTAATTGT 1819
Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGCC 830
| |||| | |||| |||| | ||||||||||||||||||||| ||||||| |||
Sbjct 1818 CGGTCGAGTCAAAGCTGAGGTCAATAAACATGTGATCTGAGGCTTTGTTTTTTAC-AGCC 1760
Query 831 AAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCGC 890
||||||||||| || || | ||||||||| ||||||| | || || || |||| ||||
Sbjct 1759 CAGGTGTGTATATTACTTGTTTGCTCGACGGTGCCGGAAAGCGGTAAGTTCGTTTCGCGC 1700
Query 891 AGCGGCCAGAAAGTTGTCACTTTCCGGCCGGAGGGCAGAAAA 932
|||||||||||| || | ||| | |||||||| ||||
Sbjct 1699 AGCGGCCAGAAACTTTAAGCAATCCAACTGGAGGGCACAAAA 1658
>seq1359
Length=145664
Score = 194 bits (214), Expect = 3e-45
Identities = 177/222 (80%), Gaps = 1/222 (0%)
Strand=Plus/Plus
Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770
|||||| ||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct 140029 ATAGTAGATTACATACGTAGGCCAGTAAAATAAGAAATGCCTCAGATCACATTTAATTGT 140088
Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGCC 830
| |||| | |||| |||| | ||||||||||||||||||||| ||||||| |||
Sbjct 140089 CGGTCGAGTCAAAGCTGAGGTCAATAAACATGTGATCTGAGGCTTTGTTTTTTAC-AGCC 140147
Query 831 AAGGTGTGTATACTATTTTTCTGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCGC 890
||||||||||| || || | ||||||||| ||||||| | || || || |||| ||||
Sbjct 140148 CAGGTGTGTATATTACTTGTTTGCTCGACGGTGCCGGAAAGCGGTAAGTTCGTTTCGCGC 140207
Query 891 AGCGGCCAGAAAGTTGTCACTTTCCGGCCGGAGGGCAGAAAA 932
|||||||||||| || | ||| | |||||||| ||||
Sbjct 140208 AGCGGCCAGAAACTTTAAGCAATCCAACTGGAGGGCACAAAA 140249
>seq343
Length=328406
Score = 143 bits (158), Expect = 5e-30
Identities = 118/144 (82%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 792 TGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGCCAAGGTGTGTATACTATTTTTC 851
||| || |||||||||||||||||| ||||| ||||| ||| ||||||||| | |||
Sbjct 62758 TGATAATCATGTGATCTGAGGCTTTCTTTTTTTCTGGCTCAGGCGTGTATACTGCTGTTC 62817
Query 852 TGCTCGACGTAGCCGGAATGTGGCAACTTTGTTTAGCGCAGCGGCCAGAAAGTTGTCACT 911
|||||| || | ||||| | |||||||| |||| ||||||||||| ||| ||| | ||
Sbjct 62818 TGCTCGGCGGTGACGGAAGGCGGCAACTTCGTTTCGCGCAGCGGCCGGAATGTTTGCGCT 62877
Query 912 TTCCGGCCGGAGGGCAGAAAATGT 935
|||||||||||||||| || ||||
Sbjct 62878 TTCCGGCCGGAGGGCATAACATGT 62901
>seq61
Length=338657
Score = 98.7 bits (108), Expect = 2e-16
Identities = 102/131 (78%), Gaps = 2/131 (2%)
Strand=Plus/Plus
Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGT-AATTG 769
|||||||||||| |||||||||| | |||||| || ||| |||| | ||||| ||||
Sbjct 12966 ATAGTATATTACGTACCTAGGCCGGGAAAATATAGAATGTCCCAGATCGCATGTGTATTG 13025
Query 770 TTGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGAGGCTTTACTTTTTACTGGC 829
| ||||||||||||| ||| || |||||||| ||||||| || || || || | |||
Sbjct 13026 CCGCCCGAGGCGAAGCCGAGGGTGGCAAACATGCGATCTGA-GCATTCTTTGTTCCCGGC 13084
Query 830 CAAGGTGTGTA 840
| |||| |||
Sbjct 13085 CGTGGTGCGTA 13095
>seq753
Length=34035
Score = 82.4 bits (90), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 8/129 (6%)
Strand=Plus/Minus
Query 805 ATCTGAGGCTTTACTTTTTACTGGCCAAGGTGTGTATACTATTTTTCTGCTCGACGTAGC 864
|| || |||||| || ||| || || ||||||||||||| |||||||||| | ||
Sbjct 28848 ATGTGGGGCTTTTTTTATTAATG---AAATTGTGTATACTATTCTTCTGCTCGATGACGC 28792
Query 865 CGGAATGTGGCAACTTTGTTTAGCGCAGCGGCCAGAAAGTTGTCACTTTCCGGCCGGAGG 924
| ||| | |||| ||| || | |||| |||||||||||||||||||| |||
Sbjct 28791 CAGAAAGCGGCAT-----TTTCACGTGGTAGCCATAAAGTTGTCACTTTCCGGCCAGAGT 28737
Query 925 GCAGAAAAT 933
|||||||||
Sbjct 28736 GCAGAAAAT 28728
>seq314
Length=14808294
Score = 82.4 bits (90), Expect = 2e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 711 ATAGTATATTACATACCTAGGCCAGTAAAATAATAAAAGTCTCAGAACACATGTAATTGT 770
||||||||||||||||||||||| | ||||||| || ||| |||| | ||| | |
Sbjct 7651633 ATAGTATATTACATACCTAGGCCGGGAAAATAAAGAATGTCCCAGATCGCATTTGTATTC 7651692
Query 771 TGACCGAGGCGAAGCCAAGGTTGACAAACATGTGATCTGA 810
| || |||||||||| || || |||||||| |||||||
Sbjct 7651693 CGCCCTAGGCGAAGCCGAGAGTGGCAAACATGCGATCTGA 7651732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 102616568611320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |