Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_006657.1
Length=19820
Score E
Sequences producing significant alignments: (Bits) Value
seq1323 118 1e-22
seq379 95.1 2e-15
>seq1323
Length=15333
Score = 118 bits (130), Expect = 1e-22
Identities = 292/439 (67%), Gaps = 13/439 (3%)
Strand=Plus/Minus
Query 12737 TATTGACTTATATCAATTTCGCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCA 12796
||||||||| |||||| | | ||| || || |||||||||| ||||| ||||| |
Sbjct 4011 TATTGACTTTGATCAATATTGTTCCAACTATCGTGAAATCTTTTGAATAATGGTACGTTT 3952
Query 12797 GGACCTGAGGTTGTA---GGTA--TTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAA 12851
|| || | ||||| |||| |||| || |||| ||||| | |||| |||
Sbjct 3951 GGTCC---GTTTGTACCAGGTAGTTTTTCAG--CAAATACACCAGCTAAAATAATTTCGT 3897
Query 12852 ATATGTGATGCCTGCAAGGCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAA 12911
||||||| || | ||||| || || | ||| | | || | | | || | ||
Sbjct 3896 ATATGTGGTGACGACAAGGTAAGTAAAGTAGATCATGGTCTAAATATTGCTCTAAAATAA 3837
Query 12912 CTGCAGCTCCTTTACTTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCTTTAA 12971
|||| || || |||| | |||| ||| | | | | |||||||| |||| |||||||
Sbjct 3836 CTGCTGCGCCATTACGGTAACCTAAATTAGAATTATTTGTATCACAACATAACGCTTTAA 3777
Query 12972 TAAAGTCTGGAATTCCCCAATCATTAATAGCGTCAAACATTGCATCAGCTTGCGACTGAC 13031
| | ||| | ||||||||||| | ||| | ||||| || ||||||| ||
Sbjct 3776 TTGATTCTTTTAAACCCCAATCATTTAGAGCCCTGTAAATTGCGTCGGCTTGCGTTACAC 3717
Query 13032 CTGTTCCATCATCTAGTACTGGGATCGCTAATATTTTTTCAATTTGCCCACAACTCAATA 13091
|| | || || || | |||| | ||| ||||| ||| ||| ||| | ||| |
Sbjct 3716 CTTTACCGTCTGGTAATGCTGGTACATCTATAATTTTCTCACTTTTACCATTAGTCACAA 3657
Query 13092 CAACTGGTAGTCGTTCTTTATTTTTTCCACTTGACGTTTTT---AAAATTTTTCCATCCC 13148
||| ||||| || || ||||||| ||| || || | | | ||||||||| ||||
Sbjct 3656 CAATTGGTAATCTGTCAATATTTTTACCAATTATCGAATCTGGAATAATTTTTCCGTCCC 3597
Query 13149 AGTGAAGAACACTAGCATT 13167
| |||||||| ||||||
Sbjct 3596 AATGAAGAACTGCAGCATT 3578
Score = 118 bits (130), Expect = 1e-22
Identities = 292/439 (67%), Gaps = 13/439 (3%)
Strand=Plus/Minus
Query 12737 TATTGACTTATATCAATTTCGCCCCAGCTCTCTCGAAATCTTTTAAATAAAGGTACATCA 12796
||||||||| |||||| | | ||| || || |||||||||| ||||| ||||| |
Sbjct 8643 TATTGACTTTGATCAATATTGTTCCAACTATCGTGAAATCTTTTGAATAATGGTACGTTT 8584
Query 12797 GGACCTGAGGTTGTA---GGTA--TTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAA 12851
|| || | ||||| |||| |||| || |||| ||||| | |||| |||
Sbjct 8583 GGTCC---GTTTGTACCAGGTAGTTTTTCAG--CAAATACACCAGCTAAAATAATTTCGT 8529
Query 12852 ATATGTGATGCCTGCAAGGCAAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAA 12911
||||||| || | ||||| || || | ||| | | || | | | || | ||
Sbjct 8528 ATATGTGGTGACGACAAGGTAAGTAAAGTAGATCATGGTCTAAATATTGCTCTAAAATAA 8469
Query 12912 CTGCAGCTCCTTTACTTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCTTTAA 12971
|||| || || |||| | |||| ||| | | | | |||||||| |||| |||||||
Sbjct 8468 CTGCTGCGCCATTACGGTAACCTAAATTAGAATTATTTGTATCACAACATAACGCTTTAA 8409
Query 12972 TAAAGTCTGGAATTCCCCAATCATTAATAGCGTCAAACATTGCATCAGCTTGCGACTGAC 13031
| | ||| | ||||||||||| | ||| | ||||| || ||||||| ||
Sbjct 8408 TTGATTCTTTTAAACCCCAATCATTTAGAGCCCTGTAAATTGCGTCGGCTTGCGTTACAC 8349
Query 13032 CTGTTCCATCATCTAGTACTGGGATCGCTAATATTTTTTCAATTTGCCCACAACTCAATA 13091
|| | || || || | |||| | ||| ||||| ||| ||| ||| | ||| |
Sbjct 8348 CTTTACCGTCTGGTAATGCTGGTACATCTATAATTTTCTCACTTTTACCATTAGTCACAA 8289
Query 13092 CAACTGGTAGTCGTTCTTTATTTTTTCCACTTGACGTTTTT---AAAATTTTTCCATCCC 13148
||| ||||| || || ||||||| ||| || || | | | ||||||||| ||||
Sbjct 8288 CAATTGGTAATCTGTCAATATTTTTACCAATTATCGAATCTGGAATAATTTTTCCGTCCC 8229
Query 13149 AGTGAAGAACACTAGCATT 13167
| |||||||| ||||||
Sbjct 8228 AATGAAGAACTGCAGCATT 8210
>seq379
Length=233974
Score = 95.1 bits (104), Expect = 2e-15
Identities = 143/199 (72%), Gaps = 6/199 (3%)
Strand=Plus/Minus
Query 12844 AAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGttttttttCAAGCAACCGTTC 12903
|| ||| || || ||||| | ||||| |||||||| | | | ||| || ||| ||||
Sbjct 121266 AATTTCGAAGATATGATGACGACAAGGTAAATACAACAAGTCTGTTTGTAGTAACTGTTC 121207
Query 12904 CAGTGAAACTGCAGCTCCTTTACTTGATCCTAGATTTGCAGCAGTAGTATCACAGCATAG 12963
|| | ||||||||||| || | || || | || | ||| || ||||| |||||||
Sbjct 121206 CAATATGACTGCAGCTCCATTTGTAGAACCCAAGTTCGAAGCTGTTGTATCGCAGCATAA 121147
Query 12964 AGCTTTAAT-AAAGTCTGGAATTCCCCAATCATTAATA--GCGTCAAACATTGCATCAGC 13020
|| ||||| |||| || || ||||||||| |||| || | | | || ||||| ||
Sbjct 121146 TGCCTTAATCGAAGT-TGTAAGACCCCAATCA--AATAACGCTTTATAAATAGCATCCGC 121090
Query 13021 TTGCGACTGACCTGTTCCA 13039
||||| | ||||||||||
Sbjct 121089 TTGCGCTTTACCTGTTCCA 121071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 63301136440842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |