Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_006662.1 Length=17477 Score E Sequences producing significant alignments: (Bits) Value seq391 170 2e-38 seq461 159 4e-35 seq1371 150 2e-32 seq300 147 2e-31 seq407 132 5e-27 seq404 107 2e-19 seq512 105 7e-19 seq314 98.7 1e-16 seq236 98.7 1e-16 seq982 96.9 4e-16 seq290 91.5 2e-14 seq1 91.5 2e-14 seq152 86.0 7e-13 seq409 82.4 9e-12 seq403 82.4 9e-12 seq807 80.6 3e-11 >seq391 Length=945936 Score = 170 bits (188), Expect = 2e-38 Identities = 142/170 (84%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 4753 ATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATGC 4811 |||||||||||| |||||||||||| ||| || ||| ||||||||||||| || |||| Sbjct 322130 ATAGTATATTACGCTACAAGGGCAGGAAGGCTAGGATACCTGCACTGCGCGATATCATGC 322071 Query 4812 CCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCT-CTCAAATTTCTGCCCAT 4870 |||||||||||||||||||||||| | |||| ||||||||| || || |||||||| Sbjct 322070 CCGAGGCGAAGCCGAGGGCATCATT-CGCGCATTTCAGGGCTTCTAGCCTTCCTGCCCAT 322012 Query 4871 GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT 4920 |||| |||||||| ||||||| || | |||||||||||||| | |||| Sbjct 322011 GTAGCGTATACTATTTTTCTTTATAGCCAGTCGAAAGTACGTTTATAATT 321962 >seq461 Length=550678 Score = 159 bits (176), Expect = 4e-35 Identities = 141/172 (82%), Gaps = 3/172 (2%) Strand=Plus/Plus Query 4751 AAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-AT 4809 |||||||||||||| |||||||||||| ||| || ||||||||| |||||| || || Sbjct 310658 AAATAGTATATTACGCTACAAGGGCAGGAAGGCTAGCATTCCTGCATTGCGCGATATGAT 310717 Query 4810 GCCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCT-CTCAAATTTCTGCCC 4868 ||||||||||||||||| |||||||| |||||||||| ||| || || || ||| Sbjct 310718 GCCCGAGGCGAAGCCGAAGGCATCATTTG-CGCAGTTCAGAGCTTCTAGCCTTCCTACCC 310776 Query 4869 ATGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT 4920 |||||| |||||||| ||||||| || |||||||||||||||| | |||| Sbjct 310777 ATGTAGCGTATACTATTTTTCTTTATAGCCGGTCGAAAGTACGTTTATAATT 310828 >seq1371 Length=14516 Score = 150 bits (166), Expect = 2e-32 Identities = 108/123 (88%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATG 4810 ||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||| ||| Sbjct 4036 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACATGATG 4095 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4870 ||||||||||||||||| |||||| | |||||| ||||||| |||| ||||||||||| Sbjct 4096 CCCGAGGCGAAGCCGAGAACATCATATCGCGCAGTACAGGGCTTTCAACTTTCTGCCCAT 4155 Query 4871 GTA 4873 || Sbjct 4156 TTA 4158 Score = 82.4 bits (90), Expect = 9e-12 Identities = 67/78 (86%), Gaps = 5/78 (6%) Strand=Plus/Plus Query 4936 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 4994 |||||||| |||||||||||| | ||||||||||||| |||||||||||| |||||| Sbjct 4335 GATGCCTG-CCCCGACATTTGCCAGCACGAGCGAAGCTTGTGCTGCTGGTC---GGGGGC 4390 Query 4995 AGGCATCAAATACACCTG 5012 ||||||| || |||| || Sbjct 4391 AGGCATCGAAAACACATG 4408 >seq300 Length=762213 Score = 147 bits (162), Expect = 2e-31 Identities = 130/163 (80%), Gaps = 11/163 (7%) Strand=Plus/Plus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATG 4810 ||||||||||||| |||||||| ||||||| ||| ||||||||||||| || ||| ||| Sbjct 739343 AATAGTATATTACGCTACAAGGACAGAAAGGCTGGAATTCCTGCACTGCACGACATGATG 739402 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4870 |||||||||||||||| || ||||| ||||||| ||| ||| | ||||| Sbjct 739403 CCCGAGGCGAAGCCGATCGC----------GCAGTACAGGGCTTCCAACTTTTTACCCAT 739452 Query 4871 GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTT 4913 || | |||||||| ||||||| || |||||||||||||||| Sbjct 739453 GTGGCGTATACTATTTTTCTTTATACCCGGTCGAAAGTACGTT 739495 Score = 91.5 bits (100), Expect = 2e-14 Identities = 120/167 (72%), Gaps = 22/167 (13%) Strand=Plus/Plus Query 4747 AGAGAAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCA 4806 |||||||||||||||||| |||||||||||||||| | || ||||||||||||||| Sbjct 628049 AGAGAAATAGTATATTACGCTACAAGGGCAGAAAGGCGGA-ATTCCTGCACTGCGC---- 628103 Query 4807 TATGCCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGC 4866 || || ||| || | |||||| |||| || ||| ||| || Sbjct 628104 --------------AGTACAGTACAT-AT--CGCGCAGTACAGGTCTTCCAACTTTTTGT 628146 Query 4867 CCATGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTT 4913 |||||| | ||||||| ||||||| || ||||||||||| |||| Sbjct 628147 CCATGTGGCTTATACTATTTTTCTTTATACCCGGTCGAAAGTCCGTT 628193 Score = 86.0 bits (94), Expect = 7e-13 Identities = 66/75 (88%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 4936 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 4994 |||||||| |||||||||||| | |||||||||||||||||||||| |||| |||||| Sbjct 739677 GATGCCTG-CCCCGACATTTGCCAGCACGAGCGAAGCGAGTGCTGCGGGTC---GGGGGC 739732 Query 4995 AGGCATCAAATACAC 5009 ||||||| || |||| Sbjct 739733 AGGCATCGAAAACAC 739747 >seq407 Length=407263 Score = 132 bits (146), Expect = 5e-27 Identities = 136/174 (78%), Gaps = 9/174 (5%) Strand=Plus/Plus Query 4749 AGAAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCATA 4808 || ||||||||||||| |||||||||||| ||| || ||||||||||||||||| ||| Sbjct 338659 AGTAATAGTATATTACGCTACAAGGGCAGGAAGGCTAGGATTCCTGCACTGCGCGATATA 338718 Query 4809 -TGCCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCT-CTCAAATTTCTGC 4866 ||||| ||| ||| |||| | ||||||| |||||| || || |||| Sbjct 338719 ATGCCCTCGGCTTCGCCT------TCATT-CGCGCAGTTTAGGGCTTCTAGCCTTCCTGC 338771 Query 4867 CCATGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT 4920 ||||||||||||||||| ||||||| || |||||||||||||||| | |||| Sbjct 338772 CCATGTAGTGTATACTATTTTTCTTTATAGCCGGTCGAAAGTACGTTTATAATT 338825 >seq404 Length=584908 Score = 107 bits (118), Expect = 2e-19 Identities = 120/163 (74%), Gaps = 18/163 (11%) Strand=Plus/Plus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATG 4810 ||||||||||||| |||||| ||| ||||| || ||| |||||||||||| ||| ||| Sbjct 199268 AATAGTATATTACGCTACAAAGGCTGAAAGACTACAATTTCTGCACTGCGCGACATGATG 199327 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4870 |||||||||||||| ||| ||||||| ||| ||| ||||||| Sbjct 199328 CCCGAGGCGAAGCC-----------------AAGTACAGGGCTTCCAACTTTTTGCCCAT 199370 Query 4871 GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTT 4913 || | |||||||| ||||||| || || | |||||||||| Sbjct 199371 GTGGCGTATACTATTTTTCTTTATACCCGTTTAAAAGTACGTT 199413 Score = 87.8 bits (96), Expect = 2e-13 Identities = 67/76 (88%), Gaps = 5/76 (7%) Strand=Plus/Plus Query 4935 TGATGCCTGCCCCCGACATTT-GCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggg 4993 ||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||| Sbjct 199568 TGATGCCTG-CCCCGACATTTCCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GGGGG 199623 Query 4994 CAGGCATCAAATACAC 5009 |||||||| || |||| Sbjct 199624 CAGGCATCGAAAACAC 199639 >seq512 Length=83436 Score = 105 bits (116), Expect = 7e-19 Identities = 117/162 (72%), Gaps = 27/162 (17%) Strand=Plus/Minus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCA-TATG 4810 ||||||||||||| |||||||||||||||| ||| |||||||||||||||| || ||| Sbjct 77727 AATAGTATATTACGCTACAAGGGCAGAAAGGCTGGAATTCCTGCACTGCGCGACACGATG 77668 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4870 |||||| |||| || ||| ||| ||||||||||| Sbjct 77667 CCCGAGACGAATCC--------------------------GCTTCCAACTTTCTGCCCAT 77634 Query 4871 GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGT 4912 || | |||||||| ||||||| || ||||||||||||||| Sbjct 77633 GTGGCGTATACTATTTTTCTTTATACCCGGTCGAAAGTACGT 77592 >seq314 Length=14808294 Score = 98.7 bits (108), Expect = 1e-16 Identities = 64/69 (93%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 4936 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggCA 4995 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| Sbjct 11877400 GATGCCTGCCCCCGACATTTGCAGCACGAGCGAAGCGAGTGCTGCTGGTC-GGGTGGGCA 11877458 Query 4996 GGCATCAAA 5004 | |||| || Sbjct 11877459 GACATCGAA 11877467 Score = 80.6 bits (88), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 4836 GGCACGCAGTTCAGGGCT-CTCAAATTTCTGCCCATGTAGTGTATACTAGTTTTCTTACT 4894 |||| | ||||||||||| || || |||||||||||| |||||||| ||||||| | Sbjct 11877219 GGCAGGAAGTTCAGGGCTTCTAGCCTTCCTGCCCATGTAGCGTATACTATTTTTCTTTAT 11877278 Query 4895 ATGCGGTCGAAAGTACGTTAAAAATT 4920 | |||||||||||||||| | |||| Sbjct 11877279 AGCCGGTCGAAAGTACGTTTATAATT 11877304 >seq236 Length=27037145 Score = 98.7 bits (108), Expect = 1e-16 Identities = 85/102 (83%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 4754 TAGTATATTACACTACAAGGGCAGAAAG-TCTGAGATTCCTGCACTGCGCGCCAT-ATGC 4811 ||||||||||| ||| |||||||||||| | || |||||||||||||| | ||| |||| Sbjct 19360715 TAGTATATTACGCTAGAAGGGCAGAAAGTTATGGAATTCCTGCACTGCGTGACATGATGC 19360774 Query 4812 CCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCT 4853 ||||||| |||||| ||||||| | |||||| ||||||| Sbjct 19360775 TCGAGGCGTAGCCGA--GCATCATATCGCGCAGTACAGGGCT 19360814 >seq982 Length=11270 Score = 96.9 bits (106), Expect = 4e-16 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 4750 GAAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-A 4808 ||| ||||||||||| || ||||||||||||| || |||||||||||||||| ||| | Sbjct 7990 GAATTAGTATATTACGCTGCAAGGGCAGAAAGGTTGGAATTCCTGCACTGCGCGACATGA 8049 Query 4809 TGCCCGAGGCGAAGCCGA 4826 |||||||||||||||||| Sbjct 8050 TGCCCGAGGCGAAGCCGA 8067 Score = 82.4 bits (90), Expect = 9e-12 Identities = 65/75 (87%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 4936 GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 4994 ||||||||| || ||||||||| ||||||||||||||||||||||||||| | |||| Sbjct 8292 GATGCCTGCTCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---GTGGGC 8347 Query 4995 AGGCATCAAATACAC 5009 ||||||| || |||| Sbjct 8348 AGGCATCGAAAACAC 8362 >seq290 Length=802719 Score = 91.5 bits (100), Expect = 2e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 4936 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggg 4993 |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 362048 GATGTCTGCCCCCGACATTTCCAGCACGAGCGAAGCGAGTGCTGCTGGTCGGGGGGGG 361991 >seq1 Length=33571687 Score = 91.5 bits (100), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 4754 TAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATGCC 4812 ||||||||||| |||||||| ||| ||| || ||||||||||||||||| || ||||| Sbjct 23072778 TAGTATATTACTCTACAAGGACAGGAAGGCTAGGATTCCTGCACTGCGCGATATGATGCC 23072837 Query 4813 CGAGGCGAAGCCGAG 4827 ||||||||||||||| Sbjct 23072838 CGAGGCGAAGCCGAG 23072852 >seq152 Length=2703334 Score = 86.0 bits (94), Expect = 7e-13 Identities = 67/76 (88%), Gaps = 7/76 (9%) Strand=Plus/Plus Query 4936 GATGCCTGCCCCCGACATTTG-CGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 4994 |||||||| |||||||||||| | |||||||| |||||||||||||||||| |||||| Sbjct 878893 GATGCCTG-CCCCGACATTTGCCAGCACGAGCAAAGCGAGTGCTGCTGGTC---GGGGGC 878948 Query 4995 AGGCATC--AAATACA 5008 ||||||| ||||||| Sbjct 878949 AGGCATCGAAAATACA 878964 >seq409 Length=1876529 Score = 82.4 bits (90), Expect = 9e-12 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 4936 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggg 4993 |||| ||||||||||||||| | |||| |||||| ||||||||||||||||||||||| Sbjct 28551 GATGTCTGCCCCCGACATTTTCAGCACAAGCGAAACGAGTGCTGCTGGTCGGGGGGGG 28494 >seq403 Length=594701 Score = 82.4 bits (90), Expect = 9e-12 Identities = 69/80 (86%), Gaps = 6/80 (8%) Strand=Plus/Minus Query 4932 AATT-GATGCCTGCCCCCGACATTTGCG-GCACGAGCGAAGCGAGTGCTGCTGGTCgggg 4989 |||| |||||||| ||| ||||||||| ||||||||||||||||||||||||||| | Sbjct 183189 AATTCGATGCCTGACCC-GACATTTGCCAGCACGAGCGAAGCGAGTGCTGCTGGTC---G 183134 Query 4990 ggggCAGGCATCAAATACAC 5009 ||| |||||||| || |||| Sbjct 183133 GGGACAGGCATCGAAAACAC 183114 >seq807 Length=36833 Score = 80.6 bits (88), Expect = 3e-11 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 4936 GATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGT 4984 |||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 17647 GATGTCTGCCCCCGACATTTGCAGCACGAGCGAAGCGAGTGCTGCTGGT 17695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 55804065082560