Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq5383 342 2e-89 >seq5383 Length=901 Score = 342 bits (378), Expect = 2e-89 Identities = 594/864 (69%), Gaps = 26/864 (3%) Strand=Plus/Minus Query 39093 CCGTACAAACGCGATGGCGAGCTGCTGCAGGTCAAGCGAATCAGTACTGAACGTCCGGAC 39152 |||||||| || || || || | ||||||| ||||||||||| ||||| || || | Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801 Query 39153 GGGAAGAAAGTCATCATGGCAGAAGGTGACTGTGAACCTTGCCTGTTCGGGTGGCAAGCT 39212 || || || ||||| ||||| |||| |||||||||||||||| || || ||||| || Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741 Query 39213 CT------CGATGCTGGCGTGAGGGCGGTTG-TGCTTTGCGAAGGCGAAATTGATTGCAT 39265 | | |||| | || ||| | || || |||||||||||||| ||||| Sbjct 740 ATGCCAAACAATGCAAGAGTC-------TTGATCCTGTGTGAAGGCGAAATTGACTGCAT 688 Query 39266 GAGCTATGCGCAATACGGGATCCCGGCGCTATCTGTCCCGTTCGGTGGCGGGAAAGGCGC 39325 ||| ||| || |||||| | || || ||||||| ||||| ||||| || || || || Sbjct 687 GAGTTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGC 628 Query 39326 CAAGCAACAGTGGATTGAGTTCGAATACCACAACCTCGACAGGTTTGAAGAAATATTCAT 39385 ||||| || |||||||||||||||||||||||||| || | || ||||| | | Sbjct 627 AAAGCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTT 568 Query 39386 TTCGATGGACGTTGACGATGTCGGGCGTGAAGCAGCAAGGGAAATCGCAAGCCGACTTGG 39445 || | || || || || || | ||||||| ||||| || || | || || Sbjct 567 ATCACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGG 508 Query 39446 TGAGCATCGCTGTCGTCTGGTTACACTGCCACACAAAGATATCAACGAATGCCTGATGAA 39505 || || || ||||| || | | | | || | |||||||||||||||||| | | Sbjct 507 AGAACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGC 448 Query 39506 CGGCGTCACTGAGGATGAAATCTGGCAGTACATCGGAACAGCGTCATATTTCGACCCGGA 39565 || | ||||| ||||| | | | | ||| | ||| || | || || ||||| || Sbjct 447 TGGAATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGA 388 Query 39566 AGAGCTTTACAGCGCCCGTGAGTTTTATCAGGACACCATCAATGCTTTTTACGGCAAGCA 39625 || || || ||||| ||||| ||||||||||| | | |||| ||||| ||||| | Sbjct 387 GGAACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGA 328 Query 39626 GCAGTATCTGTTTAACCCACCGTGGGAAACGCTGGCTTACAACTTCCAGTTCCGTGAGGC 39685 || || || || | | |||||||| | || ||||||||| || | ||| | Sbjct 327 ACAATACCTATTCAGAACGCCGTGGGAGCCACTTAATTACAACTTTAGCTTTAGAGAGTC 268 Query 39686 GGAGTTAACGCTAGTCAATGGCGTGAACGGTCACGGGAAAACGGAGGTTGTCGGGCATAT 39745 || ||||| | | || || || || || ||||| ||||| || ||||| |||||||| Sbjct 267 AGAATTAACCGTTCTGAACGGTGTTAATGGACACGGCAAAACAGAAGTTGTGGGGCATAT 208 Query 39746 GGCACTTGAGGCCATGAGGCAGGGGGTAAAAAC------ATGCGTCGCATCGCTTGAACT 39799 ||||| || ||| | || | |||| ||||| ||||| | || || Sbjct 207 TATGCTTGAAGCAATGCGCCA------ACAAACCCGCGTTTGCGTGGCATCTTTGGAGCT 154 Query 39800 GAAGCCCGGGGTTTTGCTTAAACGCCTGACCAGGCAGTCAACATGCTGCAAAACGCCACC 39859 ||||| ||| | | ||||| || | || || |||| |||| ||| |||||| Sbjct 153 CAAGCCGGGGCAGCTATTAAAACGACTAATAAGACAAACAACCTGCTCTGAAAAGCCACC 94 Query 39860 AGTACTGGAAATCGAATCAGCATTTAAGTTTTACGATGACCGGCTCTGGTTATTTGGCCT 39919 | || ||||||| || || | || | |||| ||||| || || |||||||||||||| Sbjct 93 AATAATGGAAATAGATGCATCGTTCAGTGTTTATGATGATCGCCTATGGTTATTTGGCCT 34 Query 39920 GACAGGTACAGCCAAGGCTGAACG 39943 |||||| ||||||||||| ||||| Sbjct 33 GACAGGAACAGCCAAGGCAGAACG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149947540949912