Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_006949.1
Length=46900
Score E
Sequences producing significant alignments: (Bits) Value
seq5383 342 2e-89
>seq5383
Length=901
Score = 342 bits (378), Expect = 2e-89
Identities = 594/864 (69%), Gaps = 26/864 (3%)
Strand=Plus/Minus
Query 39093 CCGTACAAACGCGATGGCGAGCTGCTGCAGGTCAAGCGAATCAGTACTGAACGTCCGGAC 39152
|||||||| || || || || | ||||||| ||||||||||| ||||| || || |
Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801
Query 39153 GGGAAGAAAGTCATCATGGCAGAAGGTGACTGTGAACCTTGCCTGTTCGGGTGGCAAGCT 39212
|| || || ||||| ||||| |||| |||||||||||||||| || || ||||| ||
Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741
Query 39213 CT------CGATGCTGGCGTGAGGGCGGTTG-TGCTTTGCGAAGGCGAAATTGATTGCAT 39265
| | |||| | || ||| | || || |||||||||||||| |||||
Sbjct 740 ATGCCAAACAATGCAAGAGTC-------TTGATCCTGTGTGAAGGCGAAATTGACTGCAT 688
Query 39266 GAGCTATGCGCAATACGGGATCCCGGCGCTATCTGTCCCGTTCGGTGGCGGGAAAGGCGC 39325
||| ||| || |||||| | || || ||||||| ||||| ||||| || || || ||
Sbjct 687 GAGTTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGC 628
Query 39326 CAAGCAACAGTGGATTGAGTTCGAATACCACAACCTCGACAGGTTTGAAGAAATATTCAT 39385
||||| || |||||||||||||||||||||||||| || | || ||||| | |
Sbjct 627 AAAGCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTT 568
Query 39386 TTCGATGGACGTTGACGATGTCGGGCGTGAAGCAGCAAGGGAAATCGCAAGCCGACTTGG 39445
|| | || || || || || | ||||||| ||||| || || | || ||
Sbjct 567 ATCACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGG 508
Query 39446 TGAGCATCGCTGTCGTCTGGTTACACTGCCACACAAAGATATCAACGAATGCCTGATGAA 39505
|| || || ||||| || | | | | || | |||||||||||||||||| | |
Sbjct 507 AGAACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGC 448
Query 39506 CGGCGTCACTGAGGATGAAATCTGGCAGTACATCGGAACAGCGTCATATTTCGACCCGGA 39565
|| | ||||| ||||| | | | | ||| | ||| || | || || ||||| ||
Sbjct 447 TGGAATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGA 388
Query 39566 AGAGCTTTACAGCGCCCGTGAGTTTTATCAGGACACCATCAATGCTTTTTACGGCAAGCA 39625
|| || || ||||| ||||| ||||||||||| | | |||| ||||| ||||| |
Sbjct 387 GGAACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGA 328
Query 39626 GCAGTATCTGTTTAACCCACCGTGGGAAACGCTGGCTTACAACTTCCAGTTCCGTGAGGC 39685
|| || || || | | |||||||| | || ||||||||| || | ||| |
Sbjct 327 ACAATACCTATTCAGAACGCCGTGGGAGCCACTTAATTACAACTTTAGCTTTAGAGAGTC 268
Query 39686 GGAGTTAACGCTAGTCAATGGCGTGAACGGTCACGGGAAAACGGAGGTTGTCGGGCATAT 39745
|| ||||| | | || || || || || ||||| ||||| || ||||| ||||||||
Sbjct 267 AGAATTAACCGTTCTGAACGGTGTTAATGGACACGGCAAAACAGAAGTTGTGGGGCATAT 208
Query 39746 GGCACTTGAGGCCATGAGGCAGGGGGTAAAAAC------ATGCGTCGCATCGCTTGAACT 39799
||||| || ||| | || | |||| ||||| ||||| | || ||
Sbjct 207 TATGCTTGAAGCAATGCGCCA------ACAAACCCGCGTTTGCGTGGCATCTTTGGAGCT 154
Query 39800 GAAGCCCGGGGTTTTGCTTAAACGCCTGACCAGGCAGTCAACATGCTGCAAAACGCCACC 39859
||||| ||| | | ||||| || | || || |||| |||| ||| ||||||
Sbjct 153 CAAGCCGGGGCAGCTATTAAAACGACTAATAAGACAAACAACCTGCTCTGAAAAGCCACC 94
Query 39860 AGTACTGGAAATCGAATCAGCATTTAAGTTTTACGATGACCGGCTCTGGTTATTTGGCCT 39919
| || ||||||| || || | || | |||| ||||| || || ||||||||||||||
Sbjct 93 AATAATGGAAATAGATGCATCGTTCAGTGTTTATGATGATCGCCTATGGTTATTTGGCCT 34
Query 39920 GACAGGTACAGCCAAGGCTGAACG 39943
|||||| ||||||||||| |||||
Sbjct 33 GACAGGAACAGCCAAGGCAGAACG 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149947540949912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |