Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 188 9e-43
seq14 114 2e-20
seq410 96.9 4e-15
>seq1
Length=33571687
Score = 188 bits (208), Expect = 9e-43
Identities = 317/456 (70%), Gaps = 2/456 (0%)
Strand=Plus/Plus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
|| || || ||||||||||||| |||||||||||||||| |||||||| || |
Sbjct 24628368 TCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 24628427
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256
|||| | ||| || |||| ||||| || | || || ||||| | ||| ||| ||
Sbjct 24628428 CACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 24628486
Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316
|| ||||| | ||| | ||| || || ||||| |||||||| |||||||| || | |
Sbjct 24628487 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 24628546
Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376
|| |||| ||||||||||||||| || ||||| | ||||||| | |||||||| ||
Sbjct 24628547 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 24628606
Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436
||||| | ||| | || |||||||| || ||||| | ||| |||| | ||| || ||
Sbjct 24628607 TTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 24628666
Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496
|| ||| || || || || || | ||| |||| | ||| | || | |||
Sbjct 24628667 TACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACC 24628726
Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556
|| || || || ||| || ||| || |||| || | || ||||| || || ||
Sbjct 24628727 AATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 24628786
Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63592
|| || || || |||| |||| || ||||| ||
Sbjct 24628787 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822
Score = 152 bits (168), Expect = 6e-32
Identities = 270/391 (69%), Gaps = 7/391 (2%)
Strand=Plus/Plus
Query 62109 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62168
||||| || | ||| | ||| ||| ||||| |||||||| || | || |||||||||
Sbjct 24627100 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 24627159
Query 62169 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 62228
|| | || |||||||| | ||| ||||| | ||||| || | | ||| | || ||
Sbjct 24627160 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCA 24627219
Query 62229 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62285
|||| ||| | ||||||| || || | ||| || || |||||| |||||
Sbjct 24627220 GGAATCCTTGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 24627279
Query 62286 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62345
|| | ||| | | || || || || || | | | ||| ||||| || || || |||
Sbjct 24627280 TCGTCCCACAGATCCCTGTCTGTCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAAT 24627339
Query 62346 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62405
|||||||| | || | || |||||||| || || || || || || | ||| || ||
Sbjct 24627340 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 24627399
Query 62406 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62465
|| ||||||||||| || || || || || ||||| || || | || ||| ||| | |
Sbjct 24627400 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 24627459
Query 62466 AGACCGTATGTTCTG--ATTTTATCTTTTAG 62494
| ||| |||||||| |||||| |||| ||
Sbjct 24627460 ACACC--ATGTTCTGCAATTTTAGCTTTCAG 24627488
Score = 86.0 bits (94), Expect = 8e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 63957 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATG 64016
|| |||| ||| || ||||| ||||||| ||| ||||| ||||||||||| |||||||||
Sbjct 24629345 CTGAATACTTTCTTGGTTTCTTTGTGTAAATTGGATACTGCTATTCTGGCTGCTAGAATG 24629404
Query 64017 GCATAATCCG 64026
||||||||||
Sbjct 24629405 GCATAATCCG 24629414
>seq14
Length=421909
Score = 114 bits (126), Expect = 2e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 62274 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 62333
|| || || ||||||| ||| | ||||||| |||||| | | | | ||| ||||||
Sbjct 277594 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277535
Query 62334 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 62393
|| | |||||||| ||||| || | | ||||||||||||||| || || || |||
Sbjct 277534 ACAATAATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277475
Query 62394 ACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62446
|| || ||||| |||||||| || ||||| || || || || ||||| |||||
Sbjct 277474 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTTGGCATTGGTGC 277422
Score = 102 bits (112), Expect = 1e-16
Identities = 200/296 (68%), Gaps = 6/296 (2%)
Strand=Plus/Minus
Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62843
||||||| ||| | ||| |||||||||| | ||| | ||| ||| || || ||
Sbjct 276917 GGATAATGATTCAGATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCT 276858
Query 62844 TTCAGTTTGAGAAAATCAAATCGCC------CATCTATTACAAACATGTTCAAGGCAACA 62897
|||| ||| ||||||| | | || | |||||||| || | ||||
Sbjct 276857 TTCAATTTTAGAAAATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATG 276798
Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957
||||| | |||||| || ||||| || || | | | |||||||| || ||||||||
Sbjct 276797 GATGCTAAATTACACACTGCTACTTCGTTTGGAGAAGAGTATTGTATAATTTCAGTGCAT 276738
Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017
| |||||| | || |||||||| | |||||||||||| || || || |||
Sbjct 276737 AAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTTGATTTACGATTGCAGTGATCT 276678
Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63073
||||| || || | ||||| |||||||||| || | || || ||| || ||||
Sbjct 276677 TTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCTTTTAAAATGGCAGTCCA 276622
Score = 89.7 bits (98), Expect = 6e-13
Identities = 199/292 (68%), Gaps = 5/292 (2%)
Strand=Plus/Minus
Query 63588 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG-GTAGGAGAAGCGTGCGT 63646
|| || |||||||| || | |||| | ||| ||| ||| |||||||| || || ||
Sbjct 275836 CACCTGGACATTTGTTGGTGTATAGTACATGCAAAAAAAAAGTGTAGGAGATGCATGTGT 275777
Query 63647 AAACCATTTTTCAGAAAGTAGA-TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63705
|| | ||||||| ||| | || || ||||| || || || | |||| || ||
Sbjct 275776 GAAGTAACGTTCAGAA-GTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTAT 275718
Query 63706 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63765
||| ||||||| || | ||| | ||| | || |||| ||||| | ||||| |||
Sbjct 275717 GAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGGTCGCTCAACCA-CTTGTCCATTA 275659
Query 63766 TTT-TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63824
| | || ||||| ||| ||||| |||||||| ||||||||||| | ||| |||
Sbjct 275658 ATCCTGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCT 275599
Query 63825 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATAT 63876
| || || || | || || ||| |||| |||| ||| | || |||||
Sbjct 275598 CTGTCATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTTTTGAATTATAT 275547
>seq410
Length=4553683
Score = 96.9 bits (106), Expect = 4e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 33595 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33654
|||||||| || ||||||||||||||||||| ||| || || ||||| || | ||||||
Sbjct 2615930 TACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAGCGAGCCTCA 2615871
Query 33655 GTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTG 33714
|| | ||| ||||| | || || || ||| ||| ||||| || || || || |
Sbjct 2615870 GTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATCCGAG 2615811
Query 33715 GCTGCAAAAAACGCCAATACATG 33737
|| ||||| || ||||| |||||
Sbjct 2615810 GCAGCAAAGAATGCCAAAACATG 2615788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622899715849680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |