Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq158 125 6e-24 seq335 113 4e-20 >seq158 Length=288468 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || ||| | || || | ||||||||||| | Sbjct 90333 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90392 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | |||||| |||||| || || ||||| || ||||| || || Sbjct 90393 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90452 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||||| || || |||||||||||||||| | | | | |||||| ||| Sbjct 90453 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90512 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || ||||||| || || ||| | || ||||| Sbjct 90513 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACTTAGGGGAGG 90559 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || ||| | || || | ||||||||||| | Sbjct 90789 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 90848 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | |||||| |||||| || || ||||| || ||||| || || Sbjct 90849 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 90908 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||||| || || |||||||||||||||| | | | | |||||| ||| Sbjct 90909 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 90968 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || ||||||| || || ||| | || ||||| Sbjct 90969 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACTTAGGGGAGG 91015 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || ||| | || || | ||||||||||| | Sbjct 91245 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTTTAGAAGTCGAGGCTTCC 91304 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | |||||| |||||| || || ||||| || ||||| || || Sbjct 91305 GATACCATCGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCAGACCAG 91364 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||||| || || |||||||||||||||| | | | | |||||| ||| Sbjct 91365 CAGAGGTTGATTTTCGCTGGAAAGCAACTCGAAGATGGCCGTACTCTGTCCGATTACAAC 91424 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| || || ||||||| || || ||| | || ||||| Sbjct 91425 ATTCAGAAAGAGTCCACTCTTCATTTGGTCTTGAGACTTAGGGGAGG 91471 Score = 114 bits (126), Expect = 1e-20 Identities = 171/238 (72%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 23983 CAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTC 24041 || ||||| ||||| | || || ||||| | ||||| || | || ||| |||| || Sbjct 89184 CAGACAAACATGCAGATTTTCGTGAAAACCCTGACTGGGAAGACCATCACCCTCGAGGTT 89243 Query 24042 GAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCT 24101 ||||| |||||| |||||| | ||||| ||||| || ||||||||||| || Sbjct 89244 GAGGCTTCCGACACTATCGAGAATGTCAAGGCCAAGATCCAAGATAAAGAAGGCATTCCC 89303 Query 24102 CCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCA 24159 || || || ||||| |||| | || |||||||| ||||| ||| ||| | | ||| Sbjct 89304 CCAGACCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGACGTACTCTGTC- 89362 Query 24160 GCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| ||||| ||||||||||||||||| ||||| | || | | | |||||||| Sbjct 89363 -CGACTATAATATTCAAAAAGAATCTACCCTTCATCTGGTTCTTCGTCTTAGAGGAGG 89419 Score = 113 bits (124), Expect = 4e-20 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | ||||| ||| | ||||| | |||||||| || Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | ||||| || ||| ||||||||||| || ||||| ||||| Sbjct 89709 GATACGATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 89768 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGA-AACGTCAGCGATTATA 24168 ||||| ||||||| | || ||||||||||||||| ||| | | ||| || || | Sbjct 89769 CAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTC--TGACTACA 89826 Query 24169 ACATTCAAAAAGAATCTACAATTCA 24193 |||||||||| ||||| ||| |||| Sbjct 89827 ACATTCAAAAGGAATCCACACTTCA 89851 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || ||| | || || ||||| Sbjct 89421 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGGCTTCT 89480 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | ||||| |||||| |||||||| ||||| || || || || Sbjct 89481 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAGGGCATTCCCCCAGACCAG 89540 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAAC-GTCAGCGATTATA 24168 ||||| |||| | || || ||||| ||||| |||| || | | ||| ||| || | Sbjct 89541 CAGAGGTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGACGTACTCTGTC--CGACTACA 89598 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 | |||||||||||||||||| |||| || || || | ||||||||||| Sbjct 89599 ATATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGAGG 89647 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| || || ||||| || | |||||| | ||||| || ||| | Sbjct 90105 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACCATTACCCTTGAAGTTGAAGCCTCC 90164 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || ||||| ||||| ||||| || || || ||||| Sbjct 90165 GACACAATTGAAAACGTAAAGGCTAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAG 90224 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | | || | | || ||||||||||| |||| ||| | |||||| ||| Sbjct 90225 CAGCGTTTAATCTTTGCTGGAAAGCAACTCGAGGATGGGCGAACTTTGTCCGATTACAAC 90284 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| ||||| ||||| Sbjct 90285 ATTCAGAAAGAGTCTAC 90301 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| || | ||||| || | |||||| ||||||| || ||| Sbjct 90561 ATGCAAATCTTCGTAAAGACTCTGACTGGTAAGACTATTACCCTCGAAGTTGAAGCCTCT 90620 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 90621 GACACCATCGAGAACGTAAAGGCTAAGATCCAAGACAAGGAAGGTATTCCCCCGGACCAG 90680 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||| | |||||| || || ||||| |||||||||| Sbjct 90681 CAGCGTTTGATTTTCGCTGGAAAGCAGCTCGAAGATG 90717 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| || | ||||| || | |||||| ||||||| || ||| Sbjct 91017 ATGCAAATCTTCGTAAAGACTCTGACTGGTAAGACTATTACCCTCGAAGTTGAAGCCTCT 91076 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 91077 GACACCATCGAGAACGTAAAGGCTAAGATCCAAGACAAGGAAGGTATTCCCCCGGACCAG 91136 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||| | |||||| || || ||||| |||||||||| Sbjct 91137 CAGCGTTTGATTTTCGCTGGAAAGCAGCTCGAAGATG 91173 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| || | ||||| || | |||||| ||||||| || ||| Sbjct 91473 ATGCAAATCTTCGTAAAGACTCTGACTGGTAAGACTATTACCCTCGAAGTTGAAGCCTCT 91532 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 91533 GACACCATCGAGAACGTAAAGGCTAAGATCCAAGACAAGGAAGGTATTCCCCCGGACCAG 91592 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||| | |||||| || || ||||| |||||||||| Sbjct 91593 CAGCGTTTGATTTTCGCTGGAAAGCAGCTCGAAGATG 91629 >seq335 Length=1594555 Score = 113 bits (124), Expect = 4e-20 Identities = 153/209 (73%), Gaps = 7/209 (3%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| || |||||||| | ||||| | ||||| ||||| Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | |||||| |||||| |||||||||||||| ||||| || ||| Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAA-GATGACAGAAAC---GTCAGCGATTA 24166 || | || || | | || || ||||| ||| |||| ||||||| ||| ||||| Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTC--TGATTA 905992 Query 24167 TAACAT-TCAAAAAGAATCTACAATTCAT 24194 ||||| ||||||||||| ||| | ||| Sbjct 905993 CAACATCCCAAAAAGAATCAACACTCCAT 906021 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| || | ||||| ||| | || || | || || || || Sbjct 905587 ATGCAAATTTTTGTAAAGACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA 905646 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| || || ||||||||||| || || || |||||| Sbjct 905647 GATACCATTGAAAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 905706 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTATA 24168 ||| | ||||||| || || |||||||| ||||||| |||| || ||| ||||| | Sbjct 905707 CAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACACTATCA--GATTACA 905764 Query 24169 ACATTCAAAAAGAATCTAC 24187 | || ||||||||||| || Sbjct 905765 ATATCCAAAAAGAATCAAC 905783 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| |||||||| ||| | || ||| | |||||||| || Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||| ||||| | ||||| || ||| || || |||||||| || || || || Sbjct 906334 CGACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906393 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | ||| || || || || |||| || | | | || || || Sbjct 906394 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906453 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||| || || | ||| | || | | |||||||||| Sbjct 906454 CATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGG 906501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429904047425190