Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq335 93.3 4e-14
seq158 86.0 5e-12
>seq335
Length=1594555
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/200 (72%), Gaps = 3/200 (2%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||||||||| | || ||||| |||||||| | ||| ||| |
Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| ||| | | | | || ||| || ||| || ||||||||| |||| ||| ||
Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAA-GATGACA-AAACCATGGCCGATTATA 115463
||| | || || | ||| || |||||| | ||| |||| || ||||| || | ||||| |
Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994
Query 115464 ACAT-TCAAAAAGAGTCTAC 115482
|||| |||||||| || ||
Sbjct 905995 ACATCCCAAAAAGAATCAAC 906014
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||| |||||||| | || || |||||||| ||| | ||| || | |
Sbjct 906503 ATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTCC 906562
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|||||| | | | | || || |||||| ||||| |||||| |||| || |||
Sbjct 906563 GACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCAG 906622
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || || | ||| || ||||| | || |||| | ||| | | || || |||
Sbjct 906623 CAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAAC 906682
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
|||||||||||||| || | ||| |||| ||| | | || |||||||
Sbjct 906683 ATTCAAAAAGAGTCCACGCTTCATCTGGTCTTGCGTCTTCGCGGAGGAA 906731
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||| |||||||||||||| | || || |||||||| ||| | ||| || |
Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333
Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||||| | | | | || || |||||| ||||| |||||| |||| || ||
Sbjct 906334 CGACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906393
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| | || || | ||| || ||||| | || |||| | ||| | | || || ||
Sbjct 906394 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906453
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||||||| || | ||| |||| | | || |||||||
Sbjct 906454 CATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGG 906501
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/206 (70%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAA-CGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343
|||||||||||| ||||||| | || || || || |||||||| | ||| ||| ||
Sbjct 906045 AATGCAAATTTTCGTCAAAAACTCTGACTGGTAAGACCATTACTCTGGAAGTAGAGGCCT 906104
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|||||| ||| | | || ||| |||||| || |||||||| | || || |
Sbjct 906105 CCGACACCATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGAATTCCTCCAGACC 906164
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| | ||||| | ||| || |||||||||||||| | || | | || || |
Sbjct 906165 AGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGACGGGCGTACACTTTCTGACTACA 906224
Query 115464 ACATTCAAAAAGAGTCTACTATACAT 115489
||||||| || ||||| ||| | |||
Sbjct 906225 ACATTCAGAAGGAGTCAACTCTTCAT 906250
Score = 84.2 bits (92), Expect = 2e-11
Identities = 166/246 (67%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 115269 TTTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCG 115328
||||| || || || ||||| || ||||| ||||| | || || |||||||| ||
Sbjct 904886 TTTATTTCAGCTTCAAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTC 904945
Query 115329 TCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAG 115388
| ||| |||| || ||||| ||| | | || ||| ||||| || ||||| |
Sbjct 904946 TGGAAGTGGAGGCCTCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGG 905005
Query 115389 GCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAA 115448
| | || |||||||| | ||||| | ||| || |||||||||||||||| |
Sbjct 905006 GAATTCCTCCAGATCAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTA 905065
Query 115449 CCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAG 115508
| | | || || || ||||| || ||||| ||| | || |||| || | | |||
Sbjct 905066 CTCTTTCTGACTACAATATTCAGAAGGAGTCAACTCTTCACTTGGTCCTGCGTCTAAGAG 905125
Query 115509 GAGGAA 115514
||||||
Sbjct 905126 GAGGAA 905131
>seq158
Length=288468
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || || || || || |||||||| |||||||| || | ||| ||| | |
Sbjct 89877 ATGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCC 89936
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | | || || |||||| || ||||| || |||| || |||
Sbjct 89937 GACACGATCGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCACCAGACCAG 89996
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| || | || | || || ||||||||||| |||| || || | || ||||||
Sbjct 89997 CAGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGTCGCACATTGTCAGACTATAAC 90056
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| || || | ||| |||| ||| || | || |||||
Sbjct 90057 ATTCAAAAAGAATCCACGCTGCATCTGGTATTGCGACTTCGTGGAGG 90103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425312388699760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |