Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq335 93.3 4e-14 seq158 86.0 5e-12 >seq335 Length=1594555 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||||||||| | || ||||| |||||||| | ||| ||| | Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| | | | | || ||| || ||| || ||||||||| |||| ||| || Sbjct 905875 GATACTATCGAAAATGTCAAAGCCAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAA 905934 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAA-GATGACA-AAACCATGGCCGATTATA 115463 ||| | || || | ||| || |||||| | ||| |||| || ||||| || | ||||| | Sbjct 905935 CAACGTCTCATATTTGCTGGTAAACAACTGGAAGGATGGCAGAAACCCTGTCTGATTACA 905994 Query 115464 ACAT-TCAAAAAGAGTCTAC 115482 |||| |||||||| || || Sbjct 905995 ACATCCCAAAAAGAATCAAC 906014 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| |||||||| | || || |||||||| ||| | ||| || | | Sbjct 906503 ATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTCC 906562 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| | | | | || || |||||| ||||| |||||| |||| || ||| Sbjct 906563 GACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCAG 906622 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || || | ||| || ||||| | || |||| | ||| | | || || ||| Sbjct 906623 CAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAAC 906682 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||||||||||| || | ||| |||| ||| | | || ||||||| Sbjct 906683 ATTCAAAAAGAGTCCACGCTTCATCTGGTCTTGCGTCTTCGCGGAGGAA 906731 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||||||||| | || || |||||||| ||| | ||| || | Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| | | | | || || |||||| ||||| |||||| |||| || || Sbjct 906334 CGACACTATCGAAAACGTCAAGGCTAAAATTCAGGATAAGGAAGGCATCCCACCAGACCA 906393 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || || | ||| || ||||| | || |||| | ||| | | || || || Sbjct 906394 GCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTACAA 906453 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||||||| || | ||| |||| | | || ||||||| Sbjct 906454 CATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGG 906501 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAA-CGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343 |||||||||||| ||||||| | || || || || |||||||| | ||| ||| || Sbjct 906045 AATGCAAATTTTCGTCAAAAACTCTGACTGGTAAGACCATTACTCTGGAAGTAGAGGCCT 906104 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| ||| | | || ||| |||||| || |||||||| | || || | Sbjct 906105 CCGACACCATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGAATTCCTCCAGACC 906164 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| | ||||| | ||| || |||||||||||||| | || | | || || | Sbjct 906165 AGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGACGGGCGTACACTTTCTGACTACA 906224 Query 115464 ACATTCAAAAAGAGTCTACTATACAT 115489 ||||||| || ||||| ||| | ||| Sbjct 906225 ACATTCAGAAGGAGTCAACTCTTCAT 906250 Score = 84.2 bits (92), Expect = 2e-11 Identities = 166/246 (67%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 115269 TTTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCG 115328 ||||| || || || ||||| || ||||| ||||| | || || |||||||| || Sbjct 904886 TTTATTTCAGCTTCAAGATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTC 904945 Query 115329 TCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAG 115388 | ||| |||| || ||||| ||| | | || ||| ||||| || ||||| | Sbjct 904946 TGGAAGTGGAGGCCTCAGACACCATTGAAAATGTCAAAGCTAAAATCCAGGACAAAGAGG 905005 Query 115389 GCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAA 115448 | | || |||||||| | ||||| | ||| || |||||||||||||||| | Sbjct 905006 GAATTCCTCCAGATCAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTA 905065 Query 115449 CCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAG 115508 | | | || || || ||||| || ||||| ||| | || |||| || | | ||| Sbjct 905066 CTCTTTCTGACTACAATATTCAGAAGGAGTCAACTCTTCACTTGGTCCTGCGTCTAAGAG 905125 Query 115509 GAGGAA 115514 |||||| Sbjct 905126 GAGGAA 905131 >seq158 Length=288468 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || || || || |||||||| |||||||| || | ||| ||| | | Sbjct 89877 ATGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCC 89936 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || || |||||| || ||||| || |||| || ||| Sbjct 89937 GACACGATCGAAAATGTGAAGGCTAAAATTCAGGACAAAGAGGGAATCCCACCAGACCAG 89996 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | || | || || ||||||||||| |||| || || | || |||||| Sbjct 89997 CAGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGTCGCACATTGTCAGACTATAAC 90056 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || || | ||| |||| ||| || | || ||||| Sbjct 90057 ATTCAAAAAGAATCCACGCTGCATCTGGTATTGCGACTTCGTGGAGG 90103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425312388699760