Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_007805.1
Length=39199
Score E
Sequences producing significant alignments: (Bits) Value
seq2807 149 2e-31
seq5024 111 4e-20
>seq2807
Length=852
Score = 149 bits (164), Expect = 2e-31
Identities = 322/482 (67%), Gaps = 0/482 (0%)
Strand=Plus/Plus
Query 5464 GATAACGCCTACAACGGCATGACGCTCCGCGAACTGGCCCGTGCCTCGCTGGTCGATCGC 5523
||||||||||| ||| ||||||| || || || | || || || || ||| || ||
Sbjct 307 GATAACGCCTATAACAGCATGACACTGCGTGAGTTAGCACGCGCATCACTGACGGAGCGT 366
Query 5524 GGGATCGGCGTGGCCTCGCTCAACGCGCCGCAAATGGTCGGCTTGGCCTTCACCCACACT 5583
|| | |||||||| || || || ||||||| | || ||||||| || ||||
Sbjct 367 GGTGTTGGCGTGGCTACGTATAATCCGATGCAAATGATTGGTATGGCCTTTACGCACAGC 426
Query 5584 TCCAGCGACTTCGGCCTGATCCTTCTGGATGTCGCCAACAAGTCGGTGCTGGCTGGCTGG 5643
|| || ||||| ||||| ||||||||||| || || || | || ||| |||
Sbjct 427 ACCTCTGATTTCGGTAATATCCTGCTGGATGTCGCGAATAAAGCGATTTTGCTTGGTTGG 486
Query 5644 GAAGAGGCCGAAGAAACCTTCCCGCTGTGGACCAAGTCCGGCATTCTCACTGACTTCAAG 5703
||||| || |||||||| ||||| || || |||| |||||| ||
Sbjct 487 GAAGAAAATGACGAAACCTTTGGAAAATGGACGAAAAAAGGACAACTCAGTGACTTTAAA 546
Query 5704 CCGGCGCGCCGCGTCGGGCTGGGCGAGTTTTCCTCGCTGCGTCAAGTGCGTGAGGGCGCC 5763
| || | || || ||| | || | ||| | || | ||| |||||||||| |||||
Sbjct 547 ACTGCACATCGTGTGGGGTTAGGGGCGTTCCCTTCATTACGTAAAGTGCGTGAAGGCGCT 606
Query 5764 GAGTACAAGTACGTCACCCTCGGCGAGCGCGGCGAGCAGATCATCCTGGCCACCTACGGA 5823
||||| || ||||| || | ||| ||||| ||| ||||| || |||||
Sbjct 607 GAGTATAAATACGTTACGTTGAACGATAAAGGCGAAACCATCGCGCTGGCAACTTACGGT 666
Query 5824 GAGCTGTTCAGCATCACCCGTCAGGCGATCATCAACGACGACCTGCAGATGCTCTCGGAT 5883
|| | ||||| || | |||||| || || ||||| || ||| || | ||| | |||||
Sbjct 667 GAATTATTCAGTATTAGCCGTCAAGCTATTATCAATGATGACATGAATATGTTGACGGAT 726
Query 5884 ATCCCGTTCAAGCTGGGCCAGGCTGCCAAGGCCACCATCGGCGACCTGGTCTATGCGGTT 5943
| || || | || | || || || ||||||||||| || |||| ||||||||
Sbjct 727 GTACCAAAGAAATTAGGTGAAGCAGCGAAAGCCACCATCGGTGATTTGGTGTATGCGGTA 786
Query 5944 CT 5945
||
Sbjct 787 CT 788
>seq5024
Length=742
Score = 111 bits (122), Expect = 4e-20
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 4600 ATCAACCTGCACATCCACTCCCCGGGCGGCGACGTCTTCGAGGGGACGGCGATCTATAAC 4659
||||| ||||| || |||||||| || || || || || || || | || || ||||||
Sbjct 514 ATCAATCTGCATATTCACTCCCCCGGTGGTGAAGTGTTTGATGGTATCGCCATTTATAAC 573
Query 4660 CTACTGCGCAACCACCCGGCCAGCGTCGACGTGTACATCGATGGCTTGGCTGCCTCGATG 4719
| ||| |||||| | || | | || || |||||||| ||||| ||||| |||
Sbjct 574 CAACTTAAAAACCACTCTGCAACAATTACGGTTTATATCGATGGTTTGGCCGCCTCAATG 633
Query 4720 GCCTCGGTCATCGCCATGGCCGGCGACACCATCTACATGCCCGAGAACGCCATGATGATG 4779
||||| || || || |||| ||| || || || ||||| | || ||||||||||||
Sbjct 634 GCCTCAGTTATTGCGATGGTCGGGGATACGGTCATTATGCCGAAAAATGCCATGATGATG 693
Query 4780 GTGCATAAGCCCTGGGGCATC-CAGGGCGGCGATGCGGACGACATGCG 4826
| || || || ||||| || || || || |||||| | || |||||
Sbjct 694 ATCCACAAACCGTGGGGTGTCTCATGG-GGAGATGCGAATGATATGCG 740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125306125456436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |