Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1 194 2e-44
seq14 114 2e-20
seq410 93.3 5e-14
>seq1
Length=33571687
Score = 194 bits (214), Expect = 2e-44
Identities = 318/456 (70%), Gaps = 2/456 (0%)
Strand=Plus/Plus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| || || ||||||||||||| | |||||||||||||| |||||||| || |
Sbjct 24628368 TCAAATTCCTCTCCCCAAACATCAGGTAATCCAGGACATTCATGTGGACACATTAAACTC 24628427
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111
|||| | ||| || |||| ||||| || | || || ||||| | ||| ||| ||
Sbjct 24628428 CACTTTGTGTCCTCAAGAACTCTCTTCATGAACAAGTCCGGGATCCATAAAGC-ATAGAA 24628486
Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171
|| ||||| | ||| | ||| || || ||||| |||||||| |||||||| || | |
Sbjct 24628487 AAGGTCTCTCGCTCTGTTTTCTTCTTTACCTGTGTTCTTTTTGAGATCGAGAAATTCGAA 24628546
Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231
|| |||| ||||||||||||||| || ||||| | ||||||| | |||||||| ||
Sbjct 24628547 GATGTCAGCATGCCACGGTTCCAAATACATGGCAAACGCTCCAGGTCTCTTGTTTCCACC 24628606
Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291
||||| | ||| | || |||||||| || ||||| | ||| |||| | |||||| ||
Sbjct 24628607 TTGATCGACGTAACGCGCAGTGTTATTGTATACTCTAATCATAGGAACTAAACCATTAGA 24628666
Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351
| ||| || || || || || | ||| |||| | ||| | || | |||
Sbjct 24628667 TACACCGTTTGTGCCAGAAATTCGAGTACCAGTGGCTCTTATAGTGTGAACACTCAAACC 24628726
Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411
|| || || || ||| || ||| || |||| || | |||||||| || || ||
Sbjct 24628727 AATGCCACCAGCAGATTTGCTGACTAAAGCACATCTCTTCAGTGTATCATAAATTCCTTC 24628786
Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447
||||| || || |||| |||| || ||||| ||
Sbjct 24628787 AATACTGTCTTCAGTCATTGTAAGAAGGAAACAACT 24628822
Score = 152 bits (168), Expect = 7e-32
Identities = 270/391 (69%), Gaps = 7/391 (2%)
Strand=Plus/Plus
Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023
||||| || | ||| | ||| ||| ||||| |||||||| || | || |||||||||
Sbjct 24627100 GCTATGTGTACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATT 24627159
Query 62024 TTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 62083
|| | ||| |||||||| | ||| ||||| | ||||| || | | ||| | || ||
Sbjct 24627160 TTCAAAATGGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAGTTTCTTCAATTCATCA 24627219
Query 62084 GGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62140
|||| ||| | ||||||| || || | ||| || || |||||| |||||
Sbjct 24627220 GGAATCCTTGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCC 24627279
Query 62141 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62200
|| | ||| | | || || || || || | | | ||| ||||| || || || |||
Sbjct 24627280 TCGTCCCACAGATCCCTGTCTGTCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAAT 24627339
Query 62201 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 62260
|||||||| | || | || |||||||| || || || || || || | || || ||
Sbjct 24627340 TCTCCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTG 24627399
Query 62261 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62320
|| ||||||||||| || || || || || ||||| || || | || ||| ||| | |
Sbjct 24627400 TTGCCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGA 24627459
Query 62321 AGACCGTATGTTCTG--ATTTTATCTTTTAG 62349
| ||| |||||||| |||||| |||| ||
Sbjct 24627460 ACACC--ATGTTCTGCAATTTTAGCTTTCAG 24627488
Score = 86.0 bits (94), Expect = 8e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 63812 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATG 63871
|| |||| ||| || ||||||||||||| ||| ||||| |||||||| || |||||||||
Sbjct 24629345 CTGAATACTTTCTTGGTTTCTTTGTGTAAATTGGATACTGCTATTCTGGCTGCTAGAATG 24629404
Query 63872 GCATAATCCG 63881
||||||||||
Sbjct 24629405 GCATAATCCG 24629414
>seq14
Length=421909
Score = 114 bits (126), Expect = 2e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 62129 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 62188
|| || || ||||||| ||| | ||||||| |||||| | | | | ||| ||||||
Sbjct 277594 TTTTTCATTTCATCATCCCAAAGATTTCTCTTTGTTAAATCATTTAATAAATGTGGATTA 277535
Query 62189 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 62248
|| | |||||||| ||||| || | | ||||||||||||||| || || || |||
Sbjct 277534 ACAATAATGAATTCTCCTGACAAAACACGTCTAGTGTAAATATTACTTGTGTAAGGCTCC 277475
Query 62249 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62301
|| || ||||| |||||||| || ||||| || || || || ||||| |||||
Sbjct 277474 ACTGATTCATTGTTTCCCAATATCTGAGCTGTAGAAGCTGTTGGCATTGGTGC 277422
Score = 98.7 bits (108), Expect = 1e-15
Identities = 199/296 (67%), Gaps = 6/296 (2%)
Strand=Plus/Minus
Query 62639 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62698
||||||| ||| | ||| |||||||||| | ||| | ||| ||| || || ||
Sbjct 276917 GGATAATGATTCAGATCAATAATTTTATCTAAATTCTTAGCAACAGTTTTAACAACTTCT 276858
Query 62699 TTCAGTTTGAGAAAATCAAATCGCC------CATCTATTACAAACATGTTCAATGCAACA 62752
|||| ||| ||||||| | | || | |||||||| || | ||||
Sbjct 276857 TTCAATTTTAGAAAATTGTAGTACTGTGTTTCAACATCAACAAACATATTAACAGCAATG 276798
Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812
||||| | |||||| || ||||| || || | | | |||||||| || ||||||||
Sbjct 276797 GATGCTAAATTACACACTGCTACTTCGTTTGGAGAAGAGTATTGTATAATTTCAGTGCAT 276738
Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872
| |||||| | || || ||||| | |||||||||||| || || || |||
Sbjct 276737 AAATTACTGCTTTTAATAGTTCCAAGATTTTGTTGATTTGATTTACGATTGCAGTGATCT 276678
Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 62928
||||| || || | ||||| |||||||||| || | || || ||| || ||||
Sbjct 276677 TTATAGAGCATATAAGGAGTTCCAGTTTCAACTTGTGCTTTTAAAATGGCAGTCCA 276622
Score = 87.8 bits (96), Expect = 2e-12
Identities = 210/313 (67%), Gaps = 6/313 (2%)
Strand=Plus/Minus
Query 63144 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63203
|||| ||||| | ||| ||||| | | |||||| | |||||| || || | || | |
Sbjct 276223 TATTTTTTTTTAAATCAAGGAATTCAAAAATATCTGCATGCCAGGGCTCTAGATAAAGAG 276164
Query 63204 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63263
| | | ||||||| ||||||||| || ||||| || | | | || || || | |
Sbjct 276163 CAAATGCACCAGGCCTTTTGTTTCCACCTTGATCAATAAAGCGTACTGTATTGTTGAATA 276104
Query 63264 CTCTCAACATTGGAA-TAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC--TTC 63320
|||| | ||| || | |||| | ||| | | ||||| | | || || || |||
Sbjct 276103 CTCTGATCATAGGTACTAATCCATTTGCAAAT-CCATTATTGCT--AGCAATCGCAGTTC 276047
Query 63321 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63380
| | || | ||||||| || || ||| || || ||||| ||| || | ||
Sbjct 276046 CTTTAGCTCTAATATTATGAACACTTATACCAATACCACCTGCGGATTTGCTAATAATTG 275987
Query 63381 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 63440
| |||| ||||| || || | || || ||||||||||| || |||||| |||| | ||
Sbjct 275986 CACATCTCTTTAATGTTTCGAAAATTCCTTCTATACTATCTTCAATCATGGTAAGAATAA 275927
Query 63441 AACAGCTAGACAT 63453
|||| ||| ||||
Sbjct 275926 AACAACTAAACAT 275914
Score = 86.0 bits (94), Expect = 8e-12
Identities = 198/292 (68%), Gaps = 5/292 (2%)
Strand=Plus/Minus
Query 63443 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG-GTAGGAGAAGCGTGAGT 63501
|| || |||||||| || | |||| | ||| ||| ||| |||||||| || || ||
Sbjct 275836 CACCTGGACATTTGTTGGTGTATAGTACATGCAAAAAAAAAGTGTAGGAGATGCATGTGT 275777
Query 63502 AAACCATTTTTCAGAAAGTAGA-TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63560
|| | ||||||| ||| | || || ||||| || || || | |||| || ||
Sbjct 275776 GAAGTAACGTTCAGAA-GTATAATTATATGTCTCTATGACTTTTTCAAGATCCTCTTTAT 275718
Query 63561 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63620
||| ||||||| || | ||| | ||| | || |||| ||||| | ||||| |||
Sbjct 275717 GAAGAGCTACTGCAACTCTCATAAGCATATCTTGTGGTCGCTCAACCA-CTTGTCCATTA 275659
Query 63621 TTT-TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63679
| | || ||||| ||| ||||| |||||||| ||||||||||| | ||| |||
Sbjct 275658 ATCCTGAATAAGTAACTTTTCTCCAAGGTTTTAAATCCAAAATAGTTAAAGACAAAATCT 275599
Query 63680 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 63731
| || || || | || || ||| |||| |||| ||| | || || ||
Sbjct 275598 CTGTCATAGTCTATGGCAGAATTTAGTCTATCTTTATGTTTTTGAATTATAT 275547
>seq410
Length=4553683
Score = 93.3 bits (102), Expect = 5e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 32931 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 32990
|| || ||||| | ||| |||||||| || ||||||||||||||||||| || ||
Sbjct 2615951 TAGGTGTCAATGAGAAGGGAGTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAG 2615892
Query 32991 CCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 33050
|| |||||||| | |||||| || | ||| ||||| | || || || | | |||
Sbjct 2615891 CCATAGAAGCAGCGAGCCTCAGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTC 2615832
Query 33051 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 33094
||||| || || || || ||| ||||| || ||||| |||||
Sbjct 2615831 TCATTGACAATACCATCCGAGGCAGCAAAGAATGCCAAAACATG 2615788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633583701400800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |