Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq158 154 1e-32 seq335 143 2e-29 seq796 111 1e-19 >seq158 Length=288468 Score = 154 bits (170), Expect = 1e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||| ||| |||||||| | ||||| ||| | ||| Sbjct 91701 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAAACCATCACACTTGAAGTCGAGGCCTCT 91760 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| |||||| |||||||| || || || || ||||| Sbjct 91761 GATACGATCGAAAATGTCAAGGCTAAAATCCAGGACAAAGAGGGAATCCCGCCAGACCAG 91820 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || |||||||| |||||||| ||||||| ||| || | ||| |||||| Sbjct 91821 CAGCGTTTAATCTTTGCCGGAAAACAATTGGAAGATGGTCGTACGCTCTCCGACTACAAT 91880 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATTATA 25236 || || ||||| || || || || || || || | || || || |||||||| |||| Sbjct 91881 ATCCAGAAAGAGTCGACTCTCCACTTGGTCTTACGTCTTAGGGGTGGAAATTAATATA 91938 Score = 141 bits (156), Expect = 8e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || |||||| |||||||| | ||||| ||| | || Sbjct 89877 ATGCAGATCTTCGTTAAGACACTCACGGGTAAAACCATCACACTTGAAGTCGAGGCTTCC 89936 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | |||| ||| |||||||| || || ||||| ||||| Sbjct 89937 GACACGATCGAAAATGTGAAGGCTAAAATTCAG-GACAAAGAGGGAATCCCACCAGACCA 89995 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || || || ||||||||||| |||| |||||| || || || || Sbjct 89996 GCAGAGGTTGATCTTCGCTGGAAAACAATTAGAGGATGGTCGCACATTGTCAGACTATAA 90055 Query 25178 TATTCAAAAAGAATCCACGCTACAT 25202 |||||||||||||||||||| ||| Sbjct 90056 CATTCAAAAAGAATCCACGCTGCAT 90080 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||||||| || ||||||| | || || ||| | ||| Sbjct 89421 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTTGAGGCTTCT 89480 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| ||| | ||| | || | ||| |||||||| || ||||| || ||||| Sbjct 89481 GACACTATTGAGAATGTCAAGGCCAAGATTCAA-GACAAAGAGGGCATTCCCCCAGACCA 89539 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || || || || || | || |||| || ||| || ||| ||||| Sbjct 89540 GCAGAGGTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGACGTACTCTGTCCGACTACAA 89599 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||| || || || || || | | | |||||||| Sbjct 89600 TATTCAAAAAGAATCTACACTTCACTTGGTCTTGCGTTTGAGAGGAGG 89647 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || |||| || || ||||||| |||| || ||| | || Sbjct 89193 ATGCAGATTTTCGTGAAAACCCTGACTGGGAAGACCATCACCCTCGAGGTTGAGGCTTCC 89252 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||||||| | ||| || ||| || |||||||| ||||| || ||||| Sbjct 89253 GACACTATCGAGAATGTCAAGGCCAAGATCCAAGATAAAGAAGGCATTCCCCCAGACCAG 89312 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || || ||||| || | || |||| || ||| || ||| || ||| Sbjct 89313 CAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGACGTACTCTGTCCGACTATAAT 89372 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||| || || ||| | || || | || |||||||| Sbjct 89373 ATTCAAAAAGAATCTACCCTTCATCTGGTTCTTCGTCTTAGAGGAGG 89419 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || ||| | || || | ||||| || | ||| Sbjct 89649 ATGCAAATTTTTGTTAAGACGCTTACTGGCAAAACAATTACTCTGGAAGTCGAAGCTTCT 89708 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || ||| | ||| | |||| ||| ||||||||||| ||||| || || || Sbjct 89709 GATACGATTGAGAATGTCAAGGCTAAAATTCAA-GACAAAGAAGGTATTCCTCCAGATCA 89767 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | |||||||| || || ||| | ||||||| ||||| || || ||||| Sbjct 89768 GCAGAGGCTGATTTTTGCTGGTAAGCAACTCGAAGATGGACGCACATTGTCTGACTACAA 89827 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 |||||||| |||||||| || || Sbjct 89828 CATTCAAAAGGAATCCACACTTCA 89851 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || |||||||||||||| ||||| |||| || | ||||| || | || Sbjct 90105 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACCATTACCCTTGAAGTTGAAGCCTCC 90164 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| ||||| ||||| || || || Sbjct 90165 GACACAATTGAAAACGTAAAGGCTAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAG 90224 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || ||| | || |||| || ||| || ||||||||| Sbjct 90225 CAGCGTTTAATCTTTGCTGGAAAGCAACTCGAGGATGGGCGAACTTTGTCCGATTACAAC 90284 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| ||||| || || || || || || || Sbjct 90285 ATTCAGAAAGAGTCTACTCTCCACTTGGTACT 90316 >seq335 Length=1594555 Score = 143 bits (158), Expect = 2e-29 Identities = 173/233 (74%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || ||||| || ||| ||||||| | ||||||||| | || Sbjct 904903 ATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACTCTGGAAGTGGAGGCCTCA 904962 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| |||| |||| || |||||||| || ||||| || || Sbjct 904963 GACACCATTGAAAATGTCA---AAGCTAAAATCCAG-GACAAAGAGGGAATTCCTCCAGA 905018 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| |||| ||||| || |||||||||||||||| || ||| | || || Sbjct 905019 TCAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTA 905078 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||||| || || || || || || || || || | ||||||||||||| Sbjct 905079 CAATATTCAGAAGGAGTCAACTCTTCACTTGGTCCTGCGTCTAAGAGGAGGAA 905131 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||||||||| || || ||||||| | || || || | || Sbjct 905130 AATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTCGAAGCTTC 905189 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| |||||| |||||||| || || || || ||||| Sbjct 905190 AGACACAATTGAAAATGTCAAGGCCAAAATCCAGGACAAAGAGGGTATCCCTCCAGACCA 905249 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | |||||||| ||||| || | ||||||| || ||| | || ||||| Sbjct 905250 GCAGCGTCTGATTTTTGCTGGCAAGCAGCTTGAAGATGGACGTACTCTTTCTGACTACAA 905309 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||||| || || || || || || || || || | ||||||||||||| Sbjct 905310 TATTCAGAAGGAGTCAACTCTTCACTTGGTCCTGCGTCTAAGAGGAGGAA 905359 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| |||||||||||| |||| |||||| ||||||| | || || || | || Sbjct 905587 ATGCAAATTTTTGTAAAGACTCTGACTGGTAAAACCATCACTCTGGAGGTTGAAGCATCA 905646 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| || ||||||||||| || ||||| || Sbjct 905647 GATACCATTGAA--AATGTTAAAGCCAAAATCCAA-GACAAAGAAGGTATCCCACCAGAT 905703 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | ||||| || || || ||| | ||||||| | || | |||||| Sbjct 905704 CAACAGCGTCTGATTTTCGCAGGAAAGCAACTGGAAGATGGAAGAACACTATCAGATTAC 905763 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||||||||| || || ||| | || || | || ||||||| Sbjct 905764 AATATCCAAAAAGAATCAACTCTCCATCTTGTTCTTCGTCTTCGAGGAGG 905813 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| || || || || |||||| |||| || | ||||| || | || Sbjct 906274 AATGCAGATTTTTGTCAAAACCTTAACTGGTAAAACCATAACCTTAGAAGTCGAAGCTTC 906333 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||||||||| |||| | || |||| ||| || || ||||| || ||||| | Sbjct 906334 CGACACTATCGAAAACGTCA---AGGCTAAAATTCA-GGATAAGGAAGGCATCCCACCAG 906389 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||| ||||| | || |||||||| ||||| | || |||| | || | || | Sbjct 906390 ACCAGCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACT 906449 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||| ||||||||||| |||||||| ||| | || || | || |||||||| Sbjct 906450 ACAACATTCAAAAAGAGTCCACGCTCCATCTGGTACTTCGTCTGAGAGGAGG 906501 Score = 118 bits (130), Expect = 9e-22 Identities = 172/238 (72%), Gaps = 15/238 (6%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || |||||||| || || |||| || | ||||| ||| | ||| Sbjct 905815 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATTACTTTGGAAGTAGAGGCTTCT 905874 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || |||||||| |||| |||| || | ||| ||||||||||| || || ||||| Sbjct 905875 GATACTATCGAAAATGTCA---AAGCCAAGATTCAA-GACAAAGAAGGCATCCCTCCTGA 905930 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGC----ACTGTGGGCG 25170 |||||| || | || ||||| || |||||| | |||| ||| || || || | Sbjct 905931 CCAACAACGTCTCATATTTGCTGGTAAACAACTGGAAG--GATGGCAGAAACCCTGTCTG 905988 Query 25171 ATTACAATAT-TCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||| || ||||||||||| || || ||| | || || | || |||| |||| Sbjct 905989 ATTACAACATCCCAAAAAGAATCAACACTCCATCTTGTTCTTCGTCTTCGAGGTGGAA 906046 Score = 118 bits (130), Expect = 9e-22 Identities = 169/234 (72%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGT-AAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGT 25056 ||||||||| || || ||| ||| |||| ||||| |||| || | ||||| ||| | | Sbjct 906045 AATGCAAATTTTCGTCAAAAACTCTGACTGGTAAGACCATTACTCTGGAAGTAGAGGCCT 906104 Query 25057 CTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 | ||||| || || | || |||| |||| ||| ||||||||||| ||||| || | Sbjct 906105 CCGACACCATTGAA--AATGTTAAAGCCAAAATTCAG-GACAAAGAAGGAATTCCTCCAG 906161 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||| ||||| |||| ||||| || |||||||||||||| | || || | || | Sbjct 906162 ACCAGCAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGACGGGCGTACACTTTCTGACT 906221 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||| ||||| || || || || || ||| | || || | || |||| |||| Sbjct 906222 ACAACATTCAGAAGGAGTCAACTCTTCATCTCGTTCTCCGTCTTCGAGGTGGAA 906275 Score = 113 bits (124), Expect = 4e-20 Identities = 151/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || || ||||||||| ||||||| | ||||| || | || Sbjct 906503 ATGCAGATTTTCGTCAAAACCTTAACCGGTAAAACCATCACCTTAGAAGTTGAAGCTTCC 906562 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| | || |||| ||| || || ||||| || ||||| || Sbjct 906563 GACACTATCGAAAACGTCA---AGGCTAAAATTCA-GGATAAGGAAGGCATCCCACCAGA 906618 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || |||||||| ||||| | || |||| | || | || || Sbjct 906619 CCAGCAGCGTCTCATCTTTGCCGGTAAACAGCTGGAGGATGGAAGGACCCTTTCAGACTA 906678 Query 25175 CAATATTCAAAAAGAATCCACGCTACAT 25202 ||| ||||||||||| |||||||| ||| Sbjct 906679 CAACATTCAAAAAGAGTCCACGCTTCAT 906706 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||||||||| || || ||||||| | || || || | || Sbjct 905358 AATGCAAATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTCGAAGCTTC 905417 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | ||| |||||| |||||||| || || || || ||||| Sbjct 905418 AGATACAATTGAAAATGTCAAGGCCAAAATCCAGGACAAAGAGGGTATCCCTCCAGACCA 905477 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | |||||||| ||||| || | ||||| | | ||| | |||||||| Sbjct 905478 GCAGCGTCTGATTTTTGCTGGCAAGCAGCTTGAAGACGGAAGAACTCTTTCTGATTACAA 905537 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| |||||||| ||||| ||| | || || Sbjct 905538 CATTCAGAAAGAATCAACGCTCCATCTTGTTCT 905570 >seq796 Length=23603 Score = 111 bits (122), Expect = 1e-19 Identities = 144/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| ||||| || |||||||| || || |||| || | || || || | Sbjct 4857 ACAATGCAAATTTTTGTCAAAACTTTGACAGGCAAGACCATAACTTTAGAGGTCGAAGCT 4798 Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 || || ||||| || | || |||| |||||| || || ||||| ||||| || Sbjct 4797 TCAGATACTAT--AGAAAATGTTAAAGC-TAAAATCCAAGATAAGGAAGGTATTCCTCCA 4741 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 || |||||||| | |||||||| |||||||| ||||| |||| ||| || || |||| Sbjct 4740 GATCAACAGCGATTGATTTTTGCTGGCAAACAGTTAGAGGATGGTCGAACATTGTCCGAT 4681 Query 25173 TACAATATTCAAAAAG 25188 ||||| || || |||| Sbjct 4680 TACAACATACAGAAAG 4665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433295795333870