Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq335 114 1e-20
seq410 109 6e-19
seq414 107 2e-18
seq1 105 7e-18
>seq335
Length=1594555
Score = 114 bits (126), Expect = 1e-20
Identities = 73/77 (95%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct 924472 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGCGTGG 924413
Query 126327 GTTCGAACCCCACACCT 126343
|||||||||||||||||
Sbjct 924412 GTTCGAACCCCACACCT 924396
>seq410
Length=4553683
Score = 109 bits (120), Expect = 6e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640
|| ||||| || |||||||| || ||||||||||| ||||| |||||||||||||| | |
Sbjct 2615649 TTGGAAAGGTCTACTTCTTCTACTGTCCAAAACGAAGCTTCGGCTTTTTTGTACATGTGC 2615590
Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700
|| ||||| | |||| |||||||| | ||||| | |||||| || || || |
Sbjct 2615589 CAAATGTCGGGCCATTGGATTGGAAACAATACAAATCTTCCAGGGTTTTCCTTGAGAAGT 2615530
Query 93701 GGCTCTAGTTGTGGGTCAAA 93720
||||| | |||||| |||||
Sbjct 2615529 GGCTCCAATTGTGGATCAAA 2615510
Score = 104 bits (114), Expect = 3e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||| || || || | || || ||||||||||| || | || || || || | |||
Sbjct 2615954 ATGTAGGTGTCAATGAGAAGGGAGTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGG 2615895
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| || ||||| || | ||| || || | ||||||||| || || | ||| || |||
Sbjct 2615894 AAGCCATAGAAGCAGCGAGCCTCAGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGA 2615835
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|| |||||||| |||||||| || || ||||| || ||||| | |||| || || ||
Sbjct 2615834 TTCTCATTGACAATACCATCCGAGGCAGCAAAGAATGCCAAAACATGCGAGATGAAGTGC 2615775
Query 93542 TTCTCAT 93548
||||||
Sbjct 2615774 CTCTCAT 2615768
Score = 86.0 bits (94), Expect = 7e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175
||||| | || || | ||||||||||| || | || || | || || || |||||
Sbjct 2616278 TCGTCCCTAGAAATGAGTTCATTGCTGAAGGTAAGTCCAGGCATAAGACCACGCTTCTTC 2616219
Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235
||||| || || | ||||||||| || ||||| || || || || || || || ||
Sbjct 2616218 AGCCAGAAAATGGCAGCAAAACTGCCGCTGAAAAAGATTCCCTCGACTGCAGCGAAGGCA 2616159
Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295
| | ||||||||||| | ||| || |||||||| || | ||||| | ||
Sbjct 2616158 ATCACTCGTTCGGCAAACGTCGCGCTATCGTGACTGATCCAGTTCAGGGCCCAGTTCGCC 2616099
Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGG 93337
|| || | ||| || ||||||||||| ||||| || |||
Sbjct 2616098 TTCTTGGCGACACAGGGAAGTGTTTCGATGGCGTTGAACAGG 2616057
>seq414
Length=4040552
Score = 107 bits (118), Expect = 2e-18
Identities = 75/83 (90%), Gaps = 2/83 (2%)
Strand=Plus/Plus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||| ||||| |||||||||| || ||||||||||
Sbjct 3802522 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCGTCTGGGAGCGTGG 3802581
Query 126327 GTTCGAACCCCACACCTGACAAA 126349
||||||||||||||| | ||||
Sbjct 3802582 GTTCGAACCCCACACTTAGCAAA 3802604
>seq1
Length=33571687
Score = 105 bits (116), Expect = 7e-18
Identities = 80/92 (87%), Gaps = 2/92 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCC-GAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC-GGGAGC 126322
|| |||||||||| ||| |||||||||||| |||||||| || |||||||| ||||||
Sbjct 29101192 AGCCAGGTTGGCCCGAGCGGTCTAAGGCGCGGGATTTAAGCTCCTGTTCCCTCTGGGAGC 29101251
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATT 126354
||||||||||| |||||||||| |||||| ||
Sbjct 29101252 GTGGGTTCGAATCCCACACCTGGCAAATTTTT 29101283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556818353285520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |