Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq411 96.9 7e-15
seq236 96.9 7e-15
seq1 91.5 3e-13
seq138 89.7 1e-12
seq415 84.2 4e-11
>seq411
Length=10315142
Score = 96.9 bits (106), Expect = 7e-15
Identities = 75/88 (85%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 142489 CCGGGTGGTG-AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGT 142547
||||||||| || | |||||| |||||||||||||||||| |||||||||||||
Sbjct 5345195 CCGGGTGGTACAGTTGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAG 5345136
Query 142548 GGTCGTGGGTTCGAGCCCCACATCGGGC 142575
||||||||||||||||||||| | ||||
Sbjct 5345135 GGTCGTGGGTTCGAGCCCCACGTTGGGC 5345108
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 5428472 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5428531
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 5428532 CCCACGTTGGGC 5428543
>seq236
Length=27037145
Score = 96.9 bits (106), Expect = 7e-15
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 142049 GCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTC 142108
||| ||| |||||||||| ||| ||||||||||||||||||||||||||| | ||||||
Sbjct 9016633 GCACGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTC 9016692
Query 142109 GACCCCCGCCAGAGACGCCAGGA 142131
|| |||| |||| || || ||||
Sbjct 9016693 GATCCCCACCAGGGATGCTAGGA 9016715
>seq1
Length=33571687
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 5467354 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5467413
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 5467414 CCCCACGTTGGGC 5467426
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 5469792 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5469851
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 5469852 CCCACGTTGGGC 5469863
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 5470241 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5470300
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 5470301 CCCACGTTGGGC 5470312
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 25171104 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 25171045
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 25171044 CCCACGTTGGGC 25171033
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 27068645 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 27068586
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 27068585 CCCACGTTGGGC 27068574
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 27084475 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 27084416
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 27084415 CCCACGTTGGGC 27084404
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 28094006 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 28094065
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 28094066 CCCACGTTGGGC 28094077
Score = 86.0 bits (94), Expect = 1e-11
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||| || |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1365380 GCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1365439
Query 142564 CCCACATCGGGCAGA 142578
||||| | |||| ||
Sbjct 1365440 CCCACGTTGGGCGGA 1365454
>seq138
Length=30297376
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 24407666 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 24407725
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 24407726 CCCACGTTGGGC 24407737
>seq415
Length=1641043
Score = 84.2 bits (92), Expect = 4e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| |||| ||||| ||| ||||||||||||||||||||||||||| | |||||||| |
Sbjct 484992 GTCCCTGTAGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 484933
Query 142113 CCCGCCAGAGA 142123
||| |||| ||
Sbjct 484932 CCCACCAGGGA 484922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027756494468418
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |