Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq202 107 5e-20
seq130 78.8 2e-11
>seq202
Length=693939
Score = 107 bits (118), Expect = 5e-20
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391
|||| ||| ||| |||||||| | | | || || || || |||||||| ||| | |
Sbjct 423209 ACCCGATGTCGCGGGTCTTTCCGAAAGTGACCAAGTGCACCTTCCACAAATATGGTGCGT 423150
Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451
| ||| | || | || | ||| || |||||| | |||||| |||| | ||||||||||
Sbjct 423149 CCGGCACGGTGCAGAAGTTCGACGGTCTCTGCGTGCTCCCGCTGAACATCGTCAACGAGA 423090
Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480
|||||||| | ||||||||||||||||||
Sbjct 423089 AGATCTACGTGTTCCTCTGGTTCTGGTTC 423061
Score = 77.0 bits (84), Expect = 8e-11
Identities = 104/144 (72%), Gaps = 6/144 (4%)
Strand=Plus/Minus
Query 2677 GTGAAGGGCTTAATAAAGCTTCCAACAGTCTCCATCG---ACAATGTATTCTTCCGGTTG 2733
|||||||||||| | ||||| ||||| | ||||| |||||||| ||| | ||
Sbjct 425103 GTGAAGGGCTTACTGAAGCTCGATACAGTATGCATCGACAACAATGTA---TTCAGATTA 425047
Query 2734 CATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAG 2793
|||||| | |||| | |||||||| | || || || ||||||| || ||| |||||
Sbjct 425046 CATTACAAAGCCACCTTCATCATCCTTGTGGCCTTCTCGCTGCTGGTCACATCGAGGCAG 424987
Query 2794 TACTTCGGAAAGCTCATAGATTGC 2817
||| | ||| | | ||| || |||
Sbjct 424986 TACATTGGAGACCCCATCGACTGC 424963
>seq130
Length=816446
Score = 78.8 bits (86), Expect = 2e-11
Identities = 96/131 (73%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426
|| || || ||||||| ||| | || || | | | || |||| | |||||||||
Sbjct 459437 TGCACCTTCCACAAATTTGGTGCCTCCGGAACGATTCAGAAGCACGACGCCCTCTGCATC 459496
Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486
|| | |||| | | ||||||||||||||||| |||||||||||||||||| |||
Sbjct 459497 CTGGCTCTGAACATCCTTAACGAGAAGATCTACATCTTCCTCTGGTTCTGGTTCATCGTA 459556
Query 3487 CTAGCCATCAT 3497
|| ||| ||||
Sbjct 459557 CTGGCCGTCAT 459567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12479167623000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |