Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq236 96.9 3e-15 >seq236 Length=27037145 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 20273 GAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGC 20332 ||||| ||||||||| || || ||||| | ||||| || | || ||||||||| Sbjct 26891183 GAATAAGAGGCAATGTTGAATGGGACTCCAAGTCCCATATCAGCACTTCTTTGATACAGC 26891124 Query 20333 TGACAGGAAAGCTCACCGTCAGCTACATAAAATTG--ACATAACAAGTGACAGGGCGGAA 20390 ||||| || | ||| || ||||||||| ||||||| || | || ||||| || |||| Sbjct 26891123 TGACAAGATAACTCTCCATCAGCTACACAAAATTGCACCAGAGCA--TGACAAGGAGGAA 26891066 Query 20391 GCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCG 20450 | ||||| | | | || | || ||||| || ||||| || |||| || || | || Sbjct 26891065 GAGCCATTATAGGAATATCTACTGGATTCCAGGCGCACATTATTATTCGTCGGTCATCCG 26891006 Query 20451 GATTATTTTTTATT 20464 | || ||||||||| Sbjct 26891005 GTTTGTTTTTTATT 26890992 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 20246 ACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAA 20305 |||||||| | ||| || | || || ||| ||| ||||| || || || || | Sbjct 25468013 ACATGAGCGATCATGATGGTGAGCAGCGAGTAGGAGGCGATGTTGAATGGCACACCAAGG 25468072 Query 20306 CCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAAT 20365 ||||| || || | || ||||| || |||||||| ||||| ||||| || || || Sbjct 25468073 CCCATATCGCCGGCTCTTTGATAAAGATGACAGGAGAGCTCGCCGTCGTAGACGTAGAAC 25468132 Query 20366 TGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCA 20425 ||| | | |||| |||||||| || ||||| || | |||| | ||||||||||| Sbjct 25468133 TGAGCGAGCGAGTGGCAGGGCGGGAGGGCCATTTTCGGAATGTCCACAGGGTTCCACGCG 25468192 Query 20426 CACATAATGATTCTTCTATCGTGCGGATTATTTTT 20460 | ||| || |||| || |||| ||| || || || Sbjct 25468193 CTCATTATTATTCGCCTGTCGTCCGGGTTGTTCTT 25468227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441339156358320