Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq335 100 2e-16
seq158 91.5 1e-13
>seq335
Length=1594555
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||||||||| || || |||||||| |||||| ||| || ||||||||||| ||||
Sbjct 906501 CCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTG-A 906443
Query 33961 AATTGTCGCT-CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| ||| | | || |||| || || |||||||| || || |||||||| || ||
Sbjct 906442 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906383
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079
| || || || ||| |||||| ||| | | | | | || | || ||||
Sbjct 906382 GATGCCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGAC 906323
Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
||| | ||||| ||||| || |||| ||||| ||||| || ||||||
Sbjct 906322 TTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCATT 906274
Score = 82.4 bits (90), Expect = 6e-11
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| |||| || || || || |||||||| || |||||||||||||||||| || |
Sbjct 906273 CCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAG-A 906215
Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| ||| ||| |||| || ||||| || || ||||| || || |||||||| || ||
Sbjct 906214 AAGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGG 906155
Query 34020 CACGCTCTCTTTGTCCATAATTTT 34043
| | ||||||||| ||||||
Sbjct 906154 AATTCCTTCTTTGTCCTGAATTTT 906131
>seq158
Length=288468
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || || || ||||| ||| ||||| ||||||||||| || | |||| ||
Sbjct 89866 AGTCGAAGTACAAGGTGAAGTGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGT 89807
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
| || || | |||||| || ||||| ||||| | ||||||||| || | | |||
Sbjct 89806 CCATCTTCGAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGAATACCTTCT 89747
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCGT 34088
||||| |||||| ||| | |||| | |||||| || |||| ||| | ||
Sbjct 89746 TTGTCTTGAATTTTAGCCTTGA-CATTCTCAATCGTATCAGAAGCTTCGACTTCCAGAGT 89688
Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|||||||| || || || || || ||||| ||||||||
Sbjct 89687 AATTGTTTTGCCAGTAAGCGTCTTAACAAAAATTTGCAT 89649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397032890570596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |