Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_009514.1 Length=47021 Score E Sequences producing significant alignments: (Bits) Value seq3260 367 4e-97 seq2807 298 2e-76 seq5024 210 7e-50 seq4386 154 4e-33 seq4365 107 6e-19 seq1909 87.8 5e-13 >seq3260 Length=833 Score = 367 bits (406), Expect = 4e-97 Identities = 556/785 (71%), Gaps = 6/785 (1%) Strand=Plus/Plus Query 788 CACCACGTCGCATGCCGATTTCGGAGGCTGTTAAAAAATTCATGCGTGTTCCCAAGGGGG 847 |||| | || ||||| || |||| ||||| ||||| |||||||| || ||| | Sbjct 32 CACCGAGGCGAATGCCAGTTGCGGATGCTGTGGCAAAATATATGCGTGTACCTGTGGGAG 91 Query 848 CTGGTAACTCGGTGCCATGGGATCCTGAACTGACACCCTACATCATTGAGCCCATGAACT 907 | ||||||||||| || |||||||| | | | | || ||||| |||| || ||||| | Sbjct 92 CGGGTAACTCGGTTCCTTGGGATCCGGCAGTATCTCCTTACATTGTTGAACCTATGAATT 151 Query 908 GCCTGGCATCGCGTGAATACGATGCGGTGATTTTTGTTGGTCCTGCGCGAACAGGGAAGA 967 | | | || || || ||||| ||||| ||||| |||||||| ||||||| |||| Sbjct 152 GTTTATCGTCACGGCTCTATGATGCAGTGATATTTGTGGGTCCTGCAAGAACAGGAAAGA 211 Query 968 CCATTGGTCTGATCGATGGATGGATTGTCTATACCATCGTTTGCGATCCTTCGGACATGC 1027 | | || | || ||||| ||| | | || | || || ||||||||||| || ||| Sbjct 212 CGGTCGGGTTAATTGATGGCTGGGTGATTTACAATATTGTGTGCGATCCTTCTGATATGT 271 Query 1028 TCGTTGTGCAGATGACCGAAGATAAGGCCCGCGAGCATTCTAAAAAGCGCCTCGACAGAA 1087 | | ||||| ||||| ||||||| || | ||||| |||||| || || | | Sbjct 272 TGCTGGTGCAAATGACGCAAGATAAAGCACAAGAGCACAGTAAAAAACGGCTTTCTCGCA 331 Query 1088 CGTTCAGAAGCAGTGCGGCGGTAAAGAAAAGAATGAGTCCACGTCGTAACGACAATAATG 1147 | || | ||||| | | || | ||| | | ||||| |||||||| |||||||| | Sbjct 332 CCTTTCGTTGCAGTCCTGAAGTCAGTAAACAACTCAGTCCTCGTCGTAATGACAATAACG 391 Query 1148 TTCATGATAAG-ACGTTC-AGGGATGGCTCGTTCCTTAAAATTGGTTGGCCCTCGGTCAA 1205 | |||||| || || | | ||| || | ||||| || ||||| ||| | || Sbjct 392 TATTTGATAAATACTTTTTATCG--GGCAGTTTTTTAAAAATGGGGTGGCCATCGATTAA 449 Query 1206 CATTATGTCGTCGTCGGATTACCGGTTTGTCGCCTTAACCGATTACGACCGTTTTCCGGA 1265 | ||||| || || || | || ||| || | |||||||| |||||||| || || Sbjct 450 TGTGATGTCCTCATCTGACTTTAAGTGTGTGGCGCTCACCGATTATGACCGTTTCCCTGA 509 Query 1266 GAATATCGACAGCGAGGGTGATGGTTTCTCCCTGGCCTCAAAACGTACCACCACATTTAT 1325 |||||||| | || || ||||| || || | ||||||||||| || ||||| ||||| Sbjct 510 AGATATCGACGGTGAAGGAGATGGCTTTTCTTTAGCCTCAAAACGGACAACCACCTTTAT 569 Query 1326 GTCCGCCGGGATGACTCTGGTGGAGAGCTCGCCGGGACGTGACATCTGCGACAGCAAATG 1385 ||| || || ||||| |||||||| || || ||||| ||||| || ||| | ||||| Sbjct 570 GTCTGCGGGTATGACGCTGGTGGAAAGTTCTCCGGGGCGTGATATTACCGATACTAAATG 629 Query 1386 GCGACGTAAGTCGCCTCATGAAGCGCCACCGACGACTGGTATTCTTTCCCTTTACAATCG 1445 ||| ||| ||| ||||| ||||| || || || || |||||| | || ||||| ||||| Sbjct 630 GCGTCGTTTGTCTCCTCACGAAGCTCCGCCCACAACGGGTATTTTATCACTTTATAATCG 689 Query 1446 TGGTGACCGCCGCCGCTGGTACTGGCCATGTCCGCACTGTGGTGAGTATTTTCAGCC-AG 1504 ||||||||||| ||||||||||||| |||||| ||||| || ||||||||||| | Sbjct 690 GGGTGACCGCCGTCGCTGGTACTGGCAATGTCCTCACTGCCACGAATATTTTCAGCCTAT 749 Query 1505 CCATGGATGCCATGACCGGCTACCGTAATGAACCGGATCCCTTTAAAGCCAGTGAGGCGG 1564 || ||||| | | || || ||| | | | |||||| | |||| ||||| | | Sbjct 750 TTAT-GATGCGGTAAAAGGATATCGTGACAAGTCAGATCCCGTAGAAGCAAGTGAATCTG 808 Query 1565 CGTAT 1569 ||||| Sbjct 809 CGTAT 813 >seq2807 Length=852 Score = 298 bits (330), Expect = 2e-76 Identities = 422/591 (71%), Gaps = 9/591 (2%) Strand=Plus/Plus Query 5423 GCCATCCAATAAAAATACCCCGGCTCATATTTATGCCGGTAACGGTAATTTTGTGGGGGA 5482 ||||||||||||| ||| || |||||||| || || ||||| ||| | || || || Sbjct 198 GCCATCCAATAAAGATAATGCG---CATATTTACGCAGGAAACGGCAATATCGTCGGTGA 254 Query 5483 CGGGATCCGCCAGGCGCTGATGGCGCGTGCCGGATTTGAAAAAACCGAACGTGATAATGT 5542 | | | ||| | ||||||||||||| || | | | | ||| ||||| | Sbjct 255 CAGTGTGCGCGCCTCTGTGATGGCGCGTGCGGGTTATCAGGATTATGAAAAAGATAACGC 314 Query 5543 CTACAACGGGATGACCCTGCGTGAATATGCCCGTATGTCACTGACTGAACGGGGTATTGG 5602 ||| ||| | ||||| |||||||| | || || |||||||| || || ||| |||| Sbjct 315 CTATAACAGCATGACACTGCGTGAGTTAGCACGCGCATCACTGACGGAGCGTGGTGTTGG 374 Query 5603 GGTTTCCAGTTATAACCCGATGCAGATGGTCGGTGCGGCGTTCACACACAGTACGTCTGA 5662 || | | ||||| |||||||| ||| | ||| ||| || || ||||| || ||||| Sbjct 375 CGTGGCTACGTATAATCCGATGCAAATGATTGGTATGGCCTTTACGCACAGCACCTCTGA 434 Query 5663 CTTCGGTAATATTCTGCTGGATGTTGCGAACAAAGCCATTCTGCAGGGCTGGGAAG---A 5719 ||||||||||| ||||||||||| ||||| ||||| ||| ||| || ||||||| | Sbjct 435 TTTCGGTAATATCCTGCTGGATGTCGCGAATAAAGCGATTTTGCTTGGTTGGGAAGAAAA 494 Query 5720 TGCCCCTGAAACCTATGAACAGTGGACGCGGAAAGGTCAGTTGTCTGATTTTAAAATTGC 5779 || | ||||||| || | | |||||| ||||| || | ||| ||||||| ||| Sbjct 495 TGAC---GAAACCTTTGGAAAATGGACGAAAAAAGGACAACTCAGTGACTTTAAAACTGC 551 Query 5780 CCATCGTGTGGGTATGGGGGGCTTCAGTGCTCTGCGTCAGGTGCGTGAAGGGGCGGAATA 5839 ||||||||||| | |||| ||| | | | ||| | ||||||||||| || || || Sbjct 552 ACATCGTGTGGGGTTAGGGGCGTTCCCTTCATTACGTAAAGTGCGTGAAGGCGCTGAGTA 611 Query 5840 TAAATACGTCACCACCGGAGATAAACAGGCCACTATTGCACTGGCGACCTATGGCGAGCT 5899 ||||||||| || |||||| | || || || ||||| || || || || | Sbjct 612 TAAATACGTTACGTTGAACGATAAAGGCGAAACCATCGCGCTGGCAACTTACGGTGAATT 671 Query 5900 GTTCAGTATCACCCGTCAGGCCATTATCAATGATGATCTGAATATGCTGACCGATGTCCC 5959 |||||||| | |||||| || |||||||||||||| |||||||| |||| ||||| || Sbjct 672 ATTCAGTATTAGCCGTCAAGCTATTATCAATGATGACATGAATATGTTGACGGATGTACC 731 Query 5960 GATGAAACTGGGCCGTGCGGCGAAATCCACTATTGCCGATCTGGTTTATGC 6010 | |||| | || || |||||| |||| || | ||| |||| ||||| Sbjct 732 AAAGAAATTAGGTGAAGCAGCGAAAGCCACCATCGGTGATTTGGTGTATGC 782 >seq5024 Length=742 Score = 210 bits (232), Expect = 7e-50 Identities = 500/742 (67%), Gaps = 19/742 (3%) Strand=Plus/Plus Query 4176 TCACCCGCCCGATGTATCGTGCCTGGCTGAAACAGGCTGTGGCATCCGGTGTTATCAGGC 4235 |||| || ||||||||||| ||| | ||| ||| || || ||||| || Sbjct 7 TCACACGTCCGATGTATCGCAATTGGTTAAAAATGGCGGTAGCCAGTGGTGTGGTCGCCG 66 Query 4236 TACCCCGCGATCTTGACCGTTCTTCACTGTATACCGCGGTGTATTCCGGACCAGTGATGC 4295 | || | ||| |||| | || |||| || ||||| || || || ||||||| Sbjct 67 TGCCTCCTGATGTTGATACTAAATCCCTGTTTAATGCGGTTTACAGTGGCCCTGTGATGC 126 Query 4296 CGTGGATTGACCCTGTTAAGGAGGCTGAGGCCTGGAAAATCCAGATTCGTGGTGGAGCGG 4355 | |||||||| || || ||| ||||||| ||||||| | | | || ||||| ||| Sbjct 127 CATGGATTGATCCGAAGAAAGAGTCTGAGGCTTGGAAAACCTTGTTACGCGGTGGTGCGT 186 Query 4356 CGACAGAATCAGACTGGGTACGTGCAGGTGGTCGTAATCCGGATGATGTCAAACGTCGGC 4415 | |||||| |||||| |||| || || | || || | ||||| |||||||| | Sbjct 187 CAACAGAAAGTGACTGGATACGCGCCAAAGGGGGCAACCCTGCGGATGTGAAACGTCGTC 246 Query 4416 GCAAGGCCGAAATTGATGAAAACCG-CAAGCTGGATCTGGTATTTGATACCGATCCGGCC 4474 | || |||||||||| ||||| | | ||| |||||||||||||| ||||| || Sbjct 247 GTAAAACCGAAATTGACGAAAATAAACGATTAGGA-CTGGTATTTGATACTGATCCTGCT 305 Query 4475 AGTGATAAAGGAGGCAGCAG-TGCCG--CAAC--GAAA-CGAC-AGGAGCCACAGCACAC 4527 | ||| ||||| |||| || ||| |||| |||| ||| | || | | | Sbjct 306 AATGACAAAGG-GGCACAAGATGCTAAACAACAAGAAATCGATGATGATGCCTAAAATGT 364 Query 4528 CGACGACCAGTCCGAAGAATAATTCCTGGTTCAGGATGCAGGCT---GGTCACCAGAGTG 4584 || | ||||| || | || |||||| | ||||||||| | |||| | | Sbjct 365 CGGGG-CCAGTA--AATCAAAAAAGCTGGTTTCGCATGCAGGCTAAAGAAGACCAAACGG 421 Query 4585 ACGCGGATATTTATATTTATGACGAGATTGGTTTCTGGGGTGTTACAGCGAAGCAGTTTA 4644 ||||||| ||||||||||| || | ||| ||||| ||| || | | |||| Sbjct 422 ---CGGATATCTATATTTATGATGAAGTCGGTGGGTGGGGAATTAGCGCAAGACGCTTTA 478 Query 4645 TCAGTGATCTGAATGCACTGGGCGATATCACCCACATTAATCTCCATATTAATTCACCGG 4704 ||| | | | ||||| || ||| || || ||||| |||||| | || || | Sbjct 479 CGGAAGATTTAATCTCGCTGGGTAATCTCAGTCATATCAATCTGCATATTCACTCCCCCG 538 Query 4705 GTGGCGATGTCTTTGAAGGCATCGCCATTTTTAATGCGCTGAAAACACATGGTGCGTCCA 4764 |||| || || ||||| || |||||||||| ||| || |||| || ||| | | Sbjct 539 GTGGTGAAGTGTTTGATGGTATCGCCATTTATAACCAACTTAAAAACCACTCTGCAACAA 598 Query 4765 TTACCGTTTATGTCGACGGTGTGGCGGCGTCAATGGCGTCGGTCATTGCGATGGTGGGAA 4824 |||| |||||| |||| ||| |||| || |||||||| || || ||||||||||| || Sbjct 599 TTACGGTTTATATCGATGGTTTGGCCGCCTCAATGGCCTCAGTTATTGCGATGGTCGGGG 658 Query 4825 ACCCGGTCATTATGCCGGAAAACACCTTCATGATGATTCATAAACCATTTGGCTTTACGG 4884 | |||||||||||||| |||| || | |||||||| || ||||| | || | | Sbjct 659 ATACGGTCATTATGCCGAAAAATGCCATGATGATGATCCACAAACCGTGGGGTGTCTCAT 718 Query 4885 GCGGTGATGCGGAGGACATGCG 4906 | || |||||| | || ||||| Sbjct 719 GGGGAGATGCGAATGATATGCG 740 >seq4386 Length=1024 Score = 154 bits (170), Expect = 4e-33 Identities = 331/486 (68%), Gaps = 9/486 (2%) Strand=Plus/Plus Query 6168 AATATTCGTCCTGCGTTCGTACTGGTACCGACGGCGATGGAGTCTGTTGCTAACCAGGTC 6227 |||||||| ||||| || | || ||||| || ||| | || | || | ||||| Sbjct 73 AATATTCGCCCTGCTTTTATGCTCGTACCAACCGCGCTAGAAATCGCCGCCACTCAGGTT 132 Query 6228 ATTCGCTCCTCAAGTGTCAAGGGGGCTGACATTAACGCCGGTATTATTAACCCGGTGAAA 6287 || |||| ||||| || || || || | ||||| ||| || || || | Sbjct 133 GTTGGCTCAGGCAGTGTAAAAGGAGCGGATGTGAACGCGAATATCATCAATCCTATCCGC 192 Query 6288 GATTTTGCGACCGTTATTGCAGAGCCTCGTCTTGATGATAACAGCCAGACCACCTTCTAC 6347 || ||||| |||| | ||||| || | |||||| | || | ||||| | ||| Sbjct 193 AATATTGCGGAGATTATCACCGAGCCGCGCTTAGATGATCAGAGTGATACCACGTGGTAC 252 Query 6348 CTGGCTGCGTCCAAAGGCTCCGATACGATTGAAGTGGCTTATCTCAACGGTGTGGATACG 6407 |||| || | ||||| | || || ||||||||||| ||| | || ||||| ||| | Sbjct 253 ATGGCCTCGGCAAAAGGTACGGACACCATTGAAGTGGCGTATTTGAATGGTGTTGATGCA 312 Query 6408 CCATATATTGATCAGATGGAGGGCTTCAGTGTGGATGGCGTGACAACGAAAGTGCGTATT 6467 || |||||||| ||| || ||||| | | || || || || ||||||||||||||| Sbjct 313 CCTTATATTGACCAGCAAGAAGGCTTTACTTCTGACGGTGTTACCACGAAAGTGCGTATT 372 Query 6468 GACGCCGGTGTCGCGCCAGTTGATCACCGCGGTCTGGT--GAAATGTA-CGGCGTAAACG 6524 || |||||||| || || |||||| |||| ||| || | | || | |||||| || Sbjct 373 GATGCCGGTGTTGCACCGGTTGATTACCGTGGTTTGCTTCGCGTTGAAGCGGCGT-AATT 431 Query 6525 TCGCAGACAACAA-CTCTGATGGCCCGTAAGGGCtttttttGTACCTGAAATCAGCCCCT 6583 ||| | | ||||| ||| | |||| | ||||||||||| || || ||||| | || Sbjct 432 TCGGATA-AACAAGCTCATCTCGCCCTAACGGGCTTTTTTTATATCTAAAATC--CGGCT 488 Query 6584 GAACGGGGCTGTGCGGAGACAGTTATGGCAAAGAATTTTGTAGAAGAAGGAAAAACGGTG 6643 ||| || | ||||| ||||||||| || |||| | | || |||| |||||| Sbjct 489 TTTCGGAGCCGGAAGGAGA-AGTTATGGCTAAAAATTATCAACAACAAGGCTTAACGGTT 547 Query 6644 GCGATT 6649 | |||| Sbjct 548 GAGATT 553 >seq4365 Length=1019 Score = 107 bits (118), Expect = 6e-19 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 2487 CTATGTGCATTTCCCTGACTGGCTGGGGAGCTGGTTTTACGACGAACTGACGTATGAAGA 2546 |||| | ||||| || |||||||| | | || ||||| || ||||||| || || Sbjct 240 CTATATTCATTTTCCGGACTGGCTTGATGATTCTTTCTACGATGAGTTGACGTACGAGGA 299 Query 2547 GCGGAGTAGTGACGGGAAATGGAGTAAGCCGGGTCGCGGTGCCAACGAAGCTTTTGACCT 2606 ||| ||| ||||||||||| |||||||||| || || ||||| || |||||| | Sbjct 300 GCGCGATAGCAACGGGAAATGGGCTAAGCCGGGTAAGGGGGCTAACGAGGCATTTGACTT 359 Query 2607 GATGGTGTATGCCGAGGCTCTGGTCATTCTGCATGGATACGAAAAGATC 2655 |||||| |||||| | || | || ||| ||| |||||| ||||| ||| Sbjct 360 GATGGTATATGCCCATGCGTTAGTTATTTTGCTTGGATATGAAAAAATC 408 >seq1909 Length=5305 Score = 87.8 bits (96), Expect = 5e-13 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 14386 TTGCACCATATTCCTGAACAACTGAGCAAACGAGAGAGGTATACCGACAAATGGCAGCGA 14445 |||||||| | || | ||||| |||||||| ||| |||| ||| | ||||||| || Sbjct 55 TTGCACCACGTCCCCAATCAACTCAGCAAACGTGAGGTTTATAACGAAAGATGGCAGAGA 114 Query 14446 CGCACACACTCCCTCTGGCGTCACCGGGCATGGCACGCATCTGCCTTTACGGGGATTTAC 14505 | |||||||| | ||||| |||| |||| |||| || ||||||||||| | | Sbjct 115 CTAACACACTCAATTTGGCGCTACCGCCATTGGCGACCATCCGCTTTTACGGGGATCTCC 174 Query 14506 AACGATTTGGCCGCCG 14521 |||||||||| || || Sbjct 175 AACGATTTGGGCGGCG 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150334712911308