Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_010237.1
Length=63395
Score E
Sequences producing significant alignments: (Bits) Value
seq5383 205 4e-48
>seq5383
Length=901
Score = 205 bits (226), Expect = 4e-48
Identities = 386/564 (68%), Gaps = 8/564 (1%)
Strand=Plus/Minus
Query 15055 CCGTACAAACGCGATGGTGAGTTGTTGCAGGTCAAGCGAATCAGCACTGAGCGCCCGGAC 15114
|||||||| || || || || || |||||||| |||||||||||||||||||| || |
Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801
Query 15115 GGGAAGAAAGTCATTATGGCAGAAGGTGATTGCGAACCTTGCCTGTTCGGATGGCAGGCT 15174
|| || || ||||||||||| |||| | || ||||||||||| || || ||||||||
Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741
Query 15175 CTGG---ACGCTGGCGTGAGGGCGGTTG-TGCTTTGCGAAGGCGAAATTGATTGTATGAG 15230
|| || || | ||| ||| | || || |||||||||||||| || |||||
Sbjct 740 ATGCCAAACAATG-CAAGAGTC---TTGATCCTGTGTGAAGGCGAAATTGACTGCATGAG 685
Query 15231 CTATGCGCAATACGGCATCTCGGCGTTATCCGTGCCGTTTGGTGGCGGGAAAGGCGCTAA 15290
||| || ||||| | | || ||||| || ||||||||||| || || || || ||
Sbjct 684 TTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGCAAA 625
Query 15291 GCAACAGTGGATTGAGTTTGAGTATCACAACCTCGACAGGTTTGAGGAAATATTCATCTC 15350
||| || ||||||||||| || || |||||||| || | || ||||| | | ||
Sbjct 624 GCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTTATC 565
Query 15351 GATGGACGTTGATGATGTTGGTCGTGAAGCCGCAAGGGAAATCGTAAGCCGACTCGGTGA 15410
| || ||||| ||||| | || |||| ||||| | || | || || ||
Sbjct 564 ACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGGAGA 505
Query 15411 ACATCGTTGCCGTCTTGTTACTCTGCCGTACAAAGACATCAACGAATGCCTGATGAACGG 15470
||| ||||| || | | | | ||| | ||||| |||||||||||| | | ||
Sbjct 504 ACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGCTGG 445
Query 15471 TGTTACCGAGGATGAAATCTGGCAGTACATCGGCACGGCATCCTATTTCGATCCTGAAGA 15530
| || || ||||| | | | | ||| | || ||| | || || || ||||| ||
Sbjct 444 AATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGAGGA 385
Query 15531 ACTCTACAGTGCGCGAGAGTTTTACCAGGACACTATCAACGCTTTCTACGGCAAGAAGCA 15590
||| || || || || || ||||| ||||| | | | || || || ||||| | ||
Sbjct 384 ACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGAACA 325
Query 15591 GTATCTGTTTAATCCACCGTGGGA 15614
|| || || | | ||||||||
Sbjct 324 ATACCTATTCAGAACGCCGTGGGA 301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 202724132549368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |