Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq236 96.9 3e-15
seq1 87.8 1e-12
>seq236
Length=27037145
Score = 96.9 bits (106), Expect = 3e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACA 108523
|||||||| |||||| |||| |||||||||| | | |||||| |||||||| ||||
Sbjct 19537501 AGTGGGTGAGGGATCACCGGGTGCACCACAAGTTCACGGACACGGATGCCGACCCGCACA 19537442
Query 108524 ACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCG 108583
||||||| || || |||| ||||| ||| |||| ||||| | | |||| | ||||
Sbjct 19537441 ACGCCAAGAGAGGTTTCTTCTTCTCTCACATGGGCTGGCTGCTCGTCCGCAAGCATCCCG 19537382
Query 108584 ACGTGATC 108591
|||| |||
Sbjct 19537381 ACGTCATC 19537374
Score = 95.1 bits (104), Expect = 9e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
|||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||
Sbjct 23883706 TGGCCCTCGGCGAAGGATGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAGACCG 23883765
Query 108941 CCGAGTTGGGGAACGAC 108957
||||| | || ||| ||
Sbjct 23883766 CCGAGCTCGGCAACTAC 23883782
Score = 89.7 bits (98), Expect = 4e-13
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948
|||||||| |||||||||||||||||||| ||||||| ||||||||||| |||||||||
Sbjct 19536888 GGCGAGGGCTGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAGGCGGCCGAGTTG 19536829
Query 108949 GG 108950
||
Sbjct 19536828 GG 19536827
Score = 89.7 bits (98), Expect = 4e-13
Identities = 78/97 (80%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534
||||||||| || ||||||| | | || || |||||||||| ||| |||||||| |
Sbjct 22955229 GATCACAGGACCCATCACAAGTTCACGGAGACCGCGGCCGACCCGCACGACGCCAACCGC 22955170
Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGA 108571
|| |||| |||||||||||||| ||||| |||||||
Sbjct 22955169 GGCTTCTTCTTCTCGCACGTGGGCTGGCTGATGATGA 22955133
Score = 89.7 bits (98), Expect = 4e-13
Identities = 101/135 (75%), Gaps = 3/135 (2%)
Strand=Plus/Minus
Query 108880 TTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCC 108939
|| ||||| |||||||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct 22974503 TTTGCTCTGGGCGAGGGTTGGCACAACTACCACCACGCCTTCCCCTGGGACTACAAGGCA 22974444
Query 108940 GCCGAGTT---GGGGAACGACTTTAATTTCACCGCTAGGATATTGGACTTTGCCGCGTCG 108996
|||||| | | | ||| ||| || || ||| | | | | |||||| || |||
Sbjct 22974443 GCCGAGCTTCCGAGCTACGGCTTGAACTTGACCACGGCGTTCATCGACTTTTTTGCTTCG 22974384
Query 108997 AGAGGATGGGTCTAC 109011
| ||| |||| ||||
Sbjct 22974383 ATAGGCTGGGCCTAC 22974369
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 108448 CAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC- 108506
||||||||| || | ||||| | || ||| | || |||||||||| || || ||
Sbjct 23878336 CAGAACACCCTCTACGACTGGGTCCGGGACCACCGAGTCCACCACAAGTTTTCCGAGACC 23878395
Query 108507 GACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCAT 108566
|||| |||| || |||||| |||| | || |||| ||| | |||||||| ||||||||
Sbjct 23878396 GACG-CCGATCCGCACAACAGCAACCGCGGCTTCTTCTTCGCCCACGTGGGCTGGCTCAT 23878454
Query 108567 GATGACCAAGGACCCCGACGTGATCTCGGCCGGTCGAAAAATGGACATGACGGACATATA 108626
|||| ||| | || || || ||| | ||||| | | ||||||| ||| ||
Sbjct 23878455 GATGCGCAAACATCCTGAAGTTATCAGGAAAGGTCGGGAGGTCGACATGAGCGACGTACT 23878514
Query 108627 CTCCGATCCGGTGGT 108641
| ||||||| || ||
Sbjct 23878515 CGCCGATCCCGTCGT 23878529
>seq1
Length=33571687
Score = 87.8 bits (96), Expect = 1e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238
|| |||||||| || || || | || || || || || || | || |||||||| |
Sbjct 1701131 CCATCGCGACCAGCTCTGCCGCTTTCCTGGTAGTAGCCCTCGATCGACTTGGGCATTGTT 1701072
Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAA 118298
||| || || | ||||||| ||||| ||||||||||||||||| |||||||||| |
Sbjct 1701071 GCATGGATTACGTAGCGCACGTTTGGTTTGTCGATGCCCATCCCGAAAGCTATCGTCGCA 1701012
Query 118299 CATATCAC 118306
|| |||||
Sbjct 1701011 CAGATCAC 1701004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381744426884112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |