Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq236 96.9 3e-15 seq1 87.8 1e-12 >seq236 Length=27037145 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACA 108523 |||||||| |||||| |||| |||||||||| | | |||||| |||||||| |||| Sbjct 19537501 AGTGGGTGAGGGATCACCGGGTGCACCACAAGTTCACGGACACGGATGCCGACCCGCACA 19537442 Query 108524 ACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCG 108583 ||||||| || || |||| ||||| ||| |||| ||||| | | |||| | |||| Sbjct 19537441 ACGCCAAGAGAGGTTTCTTCTTCTCTCACATGGGCTGGCTGCTCGTCCGCAAGCATCCCG 19537382 Query 108584 ACGTGATC 108591 |||| ||| Sbjct 19537381 ACGTCATC 19537374 Score = 95.1 bits (104), Expect = 9e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||| Sbjct 23883706 TGGCCCTCGGCGAAGGATGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAGACCG 23883765 Query 108941 CCGAGTTGGGGAACGAC 108957 ||||| | || ||| || Sbjct 23883766 CCGAGCTCGGCAACTAC 23883782 Score = 89.7 bits (98), Expect = 4e-13 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948 |||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 19536888 GGCGAGGGCTGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAGGCGGCCGAGTTG 19536829 Query 108949 GG 108950 || Sbjct 19536828 GG 19536827 Score = 89.7 bits (98), Expect = 4e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534 ||||||||| || ||||||| | | || || |||||||||| ||| |||||||| | Sbjct 22955229 GATCACAGGACCCATCACAAGTTCACGGAGACCGCGGCCGACCCGCACGACGCCAACCGC 22955170 Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGA 108571 || |||| |||||||||||||| ||||| ||||||| Sbjct 22955169 GGCTTCTTCTTCTCGCACGTGGGCTGGCTGATGATGA 22955133 Score = 89.7 bits (98), Expect = 4e-13 Identities = 101/135 (75%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 108880 TTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCC 108939 || ||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct 22974503 TTTGCTCTGGGCGAGGGTTGGCACAACTACCACCACGCCTTCCCCTGGGACTACAAGGCA 22974444 Query 108940 GCCGAGTT---GGGGAACGACTTTAATTTCACCGCTAGGATATTGGACTTTGCCGCGTCG 108996 |||||| | | | ||| ||| || || ||| | | | | |||||| || ||| Sbjct 22974443 GCCGAGCTTCCGAGCTACGGCTTGAACTTGACCACGGCGTTCATCGACTTTTTTGCTTCG 22974384 Query 108997 AGAGGATGGGTCTAC 109011 | ||| |||| |||| Sbjct 22974383 ATAGGCTGGGCCTAC 22974369 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 108448 CAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC- 108506 ||||||||| || | ||||| | || ||| | || |||||||||| || || || Sbjct 23878336 CAGAACACCCTCTACGACTGGGTCCGGGACCACCGAGTCCACCACAAGTTTTCCGAGACC 23878395 Query 108507 GACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCAT 108566 |||| |||| || |||||| |||| | || |||| ||| | |||||||| |||||||| Sbjct 23878396 GACG-CCGATCCGCACAACAGCAACCGCGGCTTCTTCTTCGCCCACGTGGGCTGGCTCAT 23878454 Query 108567 GATGACCAAGGACCCCGACGTGATCTCGGCCGGTCGAAAAATGGACATGACGGACATATA 108626 |||| ||| | || || || ||| | ||||| | | ||||||| ||| || Sbjct 23878455 GATGCGCAAACATCCTGAAGTTATCAGGAAAGGTCGGGAGGTCGACATGAGCGACGTACT 23878514 Query 108627 CTCCGATCCGGTGGT 108641 | ||||||| || || Sbjct 23878515 CGCCGATCCCGTCGT 23878529 >seq1 Length=33571687 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 || |||||||| || || || | || || || || || || | || |||||||| | Sbjct 1701131 CCATCGCGACCAGCTCTGCCGCTTTCCTGGTAGTAGCCCTCGATCGACTTGGGCATTGTT 1701072 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAA 118298 ||| || || | ||||||| ||||| ||||||||||||||||| |||||||||| | Sbjct 1701071 GCATGGATTACGTAGCGCACGTTTGGTTTGTCGATGCCCATCCCGAAAGCTATCGTCGCA 1701012 Query 118299 CATATCAC 118306 || ||||| Sbjct 1701011 CAGATCAC 1701004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381744426884112