Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq335 150 2e-31 seq158 107 2e-18 >seq335 Length=1594555 Score = 150 bits (166), Expect = 2e-31 Identities = 173/229 (76%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | ||| | ||| | |||||||||| |||||||||||||| Sbjct 906273 CCACCTCGAAGACGGAGAACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 906214 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||| || | ||||||||| | | |||| |||||||| ||||| ||||| Sbjct 906213 AGTGTACGCCCGTCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGAGGA 906154 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| |||| | ||||| | ||| | |||||||| | ||| || Sbjct 906153 ATTCCTTCTTTGTCC-TGAATTTTGGCTTTAACATTTTCAATGGTGTCGGAGGCCTCTAC 906095 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT-ACAAAAATCTGCAT 138614 || | || | || |||||||||||||||||| || ||||| ||||| Sbjct 906094 TTCCAGAGTAATGGTCTTACCAGTCAGAGTTTTTGACGAAAATTTGCAT 906046 Score = 105 bits (116), Expect = 7e-18 Identities = 165/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||| | ||| | ||| | |||| || ||||| || ||||| || | Sbjct 905814 GCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATC--T 905757 Query 138447 CATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 ||||| | || || ||||| || || | | || ||||||||||| || || Sbjct 905756 GATAGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGT 905697 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 || |||||||||||||| |||||| ||| | | ||| | ||| || | | || Sbjct 905696 GGGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCA 905637 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||||| | || | ||||||||||||||||| ||||||||||| |||||| || Sbjct 905636 ACCTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTGCATGCCT 905583 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| || ||| | || | ||| | | ||||| ||||||||||||||||| Sbjct 906502 GCCTCCTCTCAGACGAAGTACCAGATGGAGCGTGGACTCTTTTTGAATGTTGTAGTCTGA 906443 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | ||||| || |||||||||| | |||| |||||||| ||||| || || Sbjct 906442 AAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGG 906383 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| || || ||| |||| | || | | ||| | ||||||| | || | Sbjct 906382 GATGCCTTCCTTATCC-TGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCGA 906324 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||||||||| | ||||| |||||||||||||| Sbjct 906323 CTTCTAAGGTTATGGTTTTACCAGTTAAGGTTTTGACAAAAATCTGCAT 906275 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || | ||| | | ||||| ||||||||||||||||| Sbjct 906729 CCTCCGCGAAGACGCAAGACCAGATGAAGCGTGGACTCTTTTTGAATGTTGTAGTCTGAA 906670 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||||| || |||||||||| | |||| |||||||| ||||| || || Sbjct 906669 AGGGTCCTTCCATCCTCCAGCTGTTTACCGGCAAAGATGAGACGCTGCTGGTCTGGTGGG 906610 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| |||| | || | | ||| | ||||||| | || || Sbjct 906609 ATGCCTTCCTTATCC-TGAATTTTAGCCTTGACGTTTTCGATAGTGTCGGAAGCTTCAAC 906551 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | |||||||| || | ||||| || |||||||||||| || Sbjct 906550 TTCTAAGGTGATGGTTTTACCGGTTAAGGTTTTGACGAAAATCTGCATGCCT 906499 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/235 (70%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGA-ATGTTGTAGTCGCT 138446 || ||||| | ||| | ||| | ||| | |||| || ||||| |||||||| || Sbjct 906044 CCACCTCGAAGACGAAGAACAAGATGGAGTGTTGATTCTTTTTGGGATGTTGTAATCAGA 905985 Query 138447 CATAGTAC--GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 || || || | | || ||||||||||| | | | || ||||| |||||||| ||| Sbjct 905984 CAGGGTTTCTGCCATCCTTCCAGTTGTTTACCAGCAAATATGAGACGTTGTTGGTCAGGA 905925 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTC 138563 || || ||||||||||| ||| | || | ||| | | ||| | || || | | ||| Sbjct 905924 GGGATGCCTTCTTTGTC-TTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGCCTC 905866 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || || | || | || || ||||||| |||||| |||||||| |||||| || Sbjct 905865 TACTTCCAAAGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAAATTTGCATGCCT 905811 >seq158 Length=288468 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || ||||||||||| ||| || ||| ||| ||||||||||| || || | | Sbjct 90298 GACTCTTTCTGAATGTTGTAATCGGACAAAGTTCGCCCATCCTCGAGTTGCTTTCCAGCA 90239 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||||| |||||| || || || || |||||||| ||||| ||| || |||| Sbjct 90238 AAGATTAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACG 90179 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | ||||||| | || || || | || | || |||||||||| ||| ||| Sbjct 90178 TTTTCAATTGTGTCGGAGGCTTCAACTTCAAGGGTAATGGTCTTACCAGTCAAAGTCTTT 90119 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 90118 ACGAAGATTTGCAT 90105 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| | ||| | ||| | ||| | | | || || |||||||| || |||||| Sbjct 89420 GCCTCCTCTAAGACGAAGAACCAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCGGA 89361 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| |||||||| || || || | |||| | | ||| ||||| || || Sbjct 89360 CAGAGTACGTCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGGGG 89301 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||| || || | | || | ||||||| | ||| || Sbjct 89300 AATGCCTTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGTGTCGGAAGCCTCAAC 89241 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| || | || || |||||||| ||||| || |||||||||||| Sbjct 89240 CTCGAGGGTGATGGTCTTCCCAGTCAGGGTTTTCACGAAAATCTGCATG 89192 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || || ||||||||| || |||||| || ||||| || || || | Sbjct 90754 GACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCG 90695 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | |||||| |||||||| || |||||||| ||||| ||| || |||| Sbjct 90694 AAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACG 90635 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | || || |||| || | || |||||||||||||| ||| Sbjct 90634 TTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTT 90575 Query 138601 ACAAAAATCTGCATGGCT 138618 || || || |||||| || Sbjct 90574 ACGAAGATTTGCATGCCT 90557 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || || ||||||||| || |||||| || ||||| || || || | Sbjct 91210 GACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCG 91151 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | |||||| |||||||| || |||||||| ||||| ||| || |||| Sbjct 91150 AAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACG 91091 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | || || |||| || | || |||||||||||||| ||| Sbjct 91090 TTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTT 91031 Query 138601 ACAAAAATCTGCATGGCT 138618 || || || |||||| || Sbjct 91030 ACGAAGATTTGCATGCCT 91013 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || || ||||||||| || |||||| || ||||| || || || | Sbjct 91666 GACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCATCTTCGAGCTGCTTTCCAGCG 91607 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | |||||| |||||||| || |||||||| ||||| ||| || |||| Sbjct 91606 AAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTAGCCTTTACG 91547 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | || || |||| || | || |||||||||||||| ||| Sbjct 91546 TTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATAGTCTTACCAGTCAGAGTCTTT 91487 Query 138601 ACAAAAATCTGCATGGCT 138618 || || || |||||| || Sbjct 91486 ACGAAGATTTGCATGCCT 91469 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||||||||||||||| || || || || |||||||| ||||| | | Sbjct 89842 GATTCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCGAGTTGCTTACCAGCA 89783 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 | || || | ||| || || ||||| |||||||||||||| ||| |||| | || | Sbjct 89782 AAAATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTGTC-TTGAATTTTAGCCTTGAC 89724 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || || | | || || || | || | ||||| ||||| || || || Sbjct 89723 ATTCTCAATCGTATCAGAAGCTTCGACTTCCAGAGTAATTGTTTTGCCAGTAAGCGTCTT 89664 Query 138600 TACAAAAATCTGCATGGCT 138618 |||||||| |||||| || Sbjct 89663 AACAAAAATTTGCATGCCT 89645 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | ||||| || ||||||||||| ||| || |||||| || Sbjct 90545 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 90486 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||||||| || || | | || | | ||| ||||| ||||| |||||||| || || Sbjct 90485 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 90426 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | ||| | | ||| | ||| |||| | ||| || || | || | | Sbjct 90425 -CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGG 90367 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || |||| || || || || |||||||| Sbjct 90366 TTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90333 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | ||||| || ||||||||||| ||| || |||||| || Sbjct 91001 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 90942 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||||||| || || | | || | | ||| ||||| ||||| |||||||| || || Sbjct 90941 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 90882 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | ||| | | ||| | ||| |||| | ||| || || | || | | Sbjct 90881 -CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGG 90823 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || |||| || || || || |||||||| Sbjct 90822 TTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 90789 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | ||||| || ||||||||||| ||| || |||||| || Sbjct 91457 CAAGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCGGACAGAGTACGGCCATC 91398 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||||||| || || | | || | | ||| ||||| ||||| |||||||| || || Sbjct 91397 TTCGAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCTGGAGGGATACCTTCCTTATC 91338 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | ||| | | ||| | ||| |||| | ||| || || | || | | Sbjct 91337 -CTGAATCTTGGCTTTGACGTTTTCGATGGTATCGGAAGCCTCGACTTCTAAAGTGATGG 91279 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || |||| || || || || |||||||| Sbjct 91278 TTTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 91245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496224572398560