Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq5383 307 3e-79 >seq5383 Length=901 Score = 307 bits (340), Expect = 3e-79 Identities = 586/862 (68%), Gaps = 22/862 (3%) Strand=Plus/Minus Query 35095 CCGTACAAACGCGATGGTGAGTTGTTGCAGGTCAAGAGAATCAGCACCGAACGTCCGGAC 35154 |||||||| || || || || || |||||||| ||| |||||||||| || || || | Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801 Query 35155 GGGAAGAAAGTCATCATGGCAGAAGGTGACTGTGAACCCTGTCTGTTCGGATGGCAGGCT 35214 || || || ||||| ||||| |||| |||||||||| || || || || |||||||| Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741 Query 35215 CT------CGATGCTGGCGTGAGGGCGGTTG-TGCTTTGCGAAGGCGAAATTGATTGCAT 35267 | | |||| | || ||| | || || |||||||||||||| ||||| Sbjct 740 ATGCCAAACAATGCAAGAGTC-------TTGATCCTGTGTGAAGGCGAAATTGACTGCAT 688 Query 35268 GAGCTATGCGCAATACGGAATTCCGGCGCTATCTGTCCCGTTCGGTGGCGGGAAAGGCGC 35327 ||| ||| || ||||| | || || ||||||| ||||| ||||| || || || || Sbjct 687 GAGTTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGC 628 Query 35328 TAAGCAACAGTGGATTGAGTTTGAATACCATAACCTCGACAGGTTTGAAGAAATATTCAT 35387 ||||| || ||||||||||| |||||||| ||||| || | || ||||| | | Sbjct 627 AAAGCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTT 568 Query 35388 TTCGATGGACGGTGATGATGTTGGTCGTGAAGCTGCAAGGGAAATCGCAAGCCGACTCGG 35447 || | || ||||| ||||| | || |||| ||||| || || | || || Sbjct 567 ATCACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGG 508 Query 35448 TGAACATCGCTGCCGTCTGGTTACACTGCCGCACAAAGATATCAACGAATGCCTGATGAA 35507 ||||| || || || || | | | | ||| | |||||||||||||||||| | | Sbjct 507 AGAACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGC 448 Query 35508 CGGCGTCGCTGAGGATGAAATCTGGCAGTACATCGGTACAGCGTCATATTTCGACCCCGA 35567 || | |||| ||||| | | | | ||| | || || | || || ||||| || Sbjct 447 TGGAATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGA 388 Query 35568 AGAGCTTTACAGCGCCCGTGAGTTTTATCAGGACACCATCAATGCTTTCTACGGCAAGCA 35627 || || || ||||| ||||| ||||||||||| | | |||| || || ||||| | Sbjct 387 GGAACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGA 328 Query 35628 GCAGTATCTGTTTAACCCACCGTGGGAAACGCTGGCTTACAACTTCCAGTTCCGTGAGGC 35687 || || || || | | |||||||| | || ||||||||| || | ||| | Sbjct 327 ACAATACCTATTCAGAACGCCGTGGGAGCCACTTAATTACAACTTTAGCTTTAGAGAGTC 268 Query 35688 GGAGTTAACGCTTGTCAATGGCGTGAACGGTCACGGAAAAACGGAGGTTGTCGGGCATAT 35747 || ||||| || | || || || || || ||||| ||||| || ||||| |||||||| Sbjct 267 AGAATTAACCGTTCTGAACGGTGTTAATGGACACGGCAAAACAGAAGTTGTGGGGCATAT 208 Query 35748 GGCACTTGAGGCCATGAGACAGGGGATAAAAAC----ATGCGTCGCATCGCTTGAACTGA 35803 ||||| || ||| | || | ||| | ||||| ||||| | || || | Sbjct 207 TATGCTTGAAGCAATGCGCCA----ACAAACCCGCGTTTGCGTGGCATCTTTGGAGCTCA 152 Query 35804 AGCCCGGGATTCTGCTTAAACGCCTGACCCGGCAGTCTACATGTTGCAAAATGCCGCCAG 35863 |||| ||| || | ||||| || | | || | || || | ||| ||| ||| Sbjct 151 AGCCGGGGCAGCTATTAAAACGACTAATAAGACAAACAACCTGCTCTGAAAAGCCACCAA 92 Query 35864 TTCTGGAAATCGAATCAGCATTTAAGTTTTACGATGACCGGCTCTGGTTATTTGGCCTGA 35923 | ||||||| || || | || | |||| ||||| || || |||||||||||||||| Sbjct 91 TAATGGAAATAGATGCATCGTTCAGTGTTTATGATGATCGCCTATGGTTATTTGGCCTGA 32 Query 35924 CAGGTACGGCCAAGGCGGAACG 35945 |||| || |||||||| ||||| Sbjct 31 CAGGAACAGCCAAGGCAGAACG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137519640965928