Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_013059.1
Length=40975
Score E
Sequences producing significant alignments: (Bits) Value
seq5383 307 3e-79
>seq5383
Length=901
Score = 307 bits (340), Expect = 3e-79
Identities = 586/862 (68%), Gaps = 22/862 (3%)
Strand=Plus/Minus
Query 33054 CCGTACAAACGCGATGGTGAGTTGTTGCAGGTCAAGAGAATCAGCACCGAACGTCCGGAC 33113
|||||||| || || || || || |||||||| ||| |||||||||| || || || |
Sbjct 860 CCGTACAAGCGAGACGGAGAATTATTGCAGGTAAAGCGAATCAGCACTGAGCGACCAAAT 801
Query 33114 GGGAAGAAAGTCATCATGGCAGAAGGTGACTGTGAACCCTGTCTGTTCGGATGGCAGGCT 33173
|| || || ||||| ||||| |||| |||||||||| || || || || ||||||||
Sbjct 800 GGCAAAAAGGTCATTATGGCTGAAGCCAACTGTGAACCTTGCCTATTTGGTTGGCAGGCA 741
Query 33174 CT------CGATGCTGGCGTGAGGGCGGTTG-TGCTTTGCGAAGGCGAAATTGATTGCAT 33226
| | |||| | || ||| | || || |||||||||||||| |||||
Sbjct 740 ATGCCAAACAATGCAAGAGTC-------TTGATCCTGTGTGAAGGCGAAATTGACTGCAT 688
Query 33227 GAGCTATGCGCAATACGGAATTCCGGCGCTATCTGTCCCGTTCGGTGGCGGGAAAGGCGC 33286
||| ||| || ||||| | || || ||||||| ||||| ||||| || || || ||
Sbjct 687 GAGTTATCACCAGTACGGGCTGCCTGCTTTATCTGTTCCGTTTGGTGGTGGAAAGGGGGC 628
Query 33287 TAAGCAACAGTGGATTGAGTTTGAATACCATAACCTCGACAGGTTTGAAGAAATATTCAT 33346
||||| || ||||||||||| |||||||| ||||| || | || ||||| | |
Sbjct 627 AAAGCAGCAATGGATTGAGTTCGAATACCACAACCTAGATCGCTTCACTGAAATTTGGTT 568
Query 33347 TTCGATGGACGGTGATGATGTTGGTCGTGAAGCTGCAAGGGAAATCGCAAGCCGACTCGG 33406
|| | || ||||| ||||| | || |||| ||||| || || | || ||
Sbjct 567 ATCACTTGATAACGATGAAGTTGGACAGATCGCAGCAAAAGAAATTGCTAGTAGGCTGGG 508
Query 33407 TGAACATCGCTGCCGTCTGGTTACACTGCCGCACAAAGATATCAACGAATGCCTGATGAA 33466
||||| || || || || | | | | ||| | |||||||||||||||||| | |
Sbjct 507 AGAACACCGTTGTCGAATGTTGAAATTACCGAAAAAAGATATCAACGAATGCTTACAGGC 448
Query 33467 CGGCGTCGCTGAGGATGAAATCTGGCAGTACATCGGTACAGCGTCATATTTCGACCCCGA 33526
|| | |||| ||||| | | | | ||| | || || | || || ||||| ||
Sbjct 447 TGGAATGACTGAAGATGAGTTATTTCGATGCATTGAAACCGCAGCGTACTTTGACCCTGA 388
Query 33527 AGAGCTTTACAGCGCCCGTGAGTTTTATCAGGACACCATCAATGCTTTCTACGGCAAGCA 33586
|| || || ||||| ||||| ||||||||||| | | |||| || || ||||| |
Sbjct 387 GGAACTGTATAGCGCTCGTGAATTTTATCAGGATGCAGTTGATGCATTTTATGGCAAAGA 328
Query 33587 GCAGTATCTGTTTAACCCACCGTGGGAAACGCTGGCTTACAACTTCCAGTTCCGTGAGGC 33646
|| || || || | | |||||||| | || ||||||||| || | ||| |
Sbjct 327 ACAATACCTATTCAGAACGCCGTGGGAGCCACTTAATTACAACTTTAGCTTTAGAGAGTC 268
Query 33647 GGAGTTAACGCTTGTCAATGGCGTGAACGGTCACGGAAAAACGGAGGTTGTCGGGCATAT 33706
|| ||||| || | || || || || || ||||| ||||| || ||||| ||||||||
Sbjct 267 AGAATTAACCGTTCTGAACGGTGTTAATGGACACGGCAAAACAGAAGTTGTGGGGCATAT 208
Query 33707 GGCACTTGAGGCCATGAGACAGGGGATAAAAAC----ATGCGTCGCATCGCTTGAACTGA 33762
||||| || ||| | || | ||| | ||||| ||||| | || || |
Sbjct 207 TATGCTTGAAGCAATGCGCCA----ACAAACCCGCGTTTGCGTGGCATCTTTGGAGCTCA 152
Query 33763 AGCCCGGGATTCTGCTTAAACGCCTGACCCGGCAGTCTACATGTTGCAAAATGCCGCCAG 33822
|||| ||| || | ||||| || | | || | || || | ||| ||| |||
Sbjct 151 AGCCGGGGCAGCTATTAAAACGACTAATAAGACAAACAACCTGCTCTGAAAAGCCACCAA 92
Query 33823 TTCTGGAAATCGAATCAGCATTTAAGTTTTACGATGACCGGCTCTGGTTATTTGGCCTGA 33882
| ||||||| || || | || | |||| ||||| || || ||||||||||||||||
Sbjct 91 TAATGGAAATAGATGCATCGTTCAGTGTTTATGATGATCGCCTATGGTTATTTGGCCTGA 32
Query 33883 CAGGTACGGCCAAGGCGGAACG 33904
|||| || |||||||| |||||
Sbjct 31 CAGGAACAGCCAAGGCAGAACG 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130988913914612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |