Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 9e-25
seq410 87.8 3e-12
>seq1
Length=33571687
Score = 129 bits (142), Expect = 9e-25
Identities = 290/419 (69%), Gaps = 14/419 (3%)
Strand=Plus/Plus
Query 203916 GCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG--GGGTCGGCCATGTGAAT 203973
|||| ||||| | |||||| || | || || || ||||| || | || ||||| |
Sbjct 24627053 GCCAGCCGTAGAAGTGCATCGACGTGAGCTTT-TC-CGTTGTTGGCTGAGCTATGTGTAC 24627110
Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032
|| |||||||| || || ||||| ||| || ||||| || ||||| || | |||||
Sbjct 24627111 ATTTAGAGACTGAGACTGATCAATGAA-GGCACCTCGATCCGCAGCCATTTTCAAAATGG 24627169
Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT-TGAGGCACATCT 204091
|||| |||||||||||||| || || ||| ||| || ||| | | ||| | ||
Sbjct 24627170 TCTTTTGCGAAATCTCCCAGACTGTTTTGTACA-GTTTCTTCAATTCATCAGGAATC-CT 24627227
Query 204092 TCCCACGTCCTGATC-GAGCCGTTGTCGGCCATCAGTCTCATCCT-CGTCTCCTCCCCCC 204149
| | |||| |||| | || ||||||| || || | | |||| || | ||||||| |||
Sbjct 24627228 TGCAACGTTCTGAACCGAACCGTTGTTTGCGATTATT-TCATTCTTCATCTCCTCGTCCC 24627286
Query 204150 ACATG-CCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCG 204208
||| ||| ||| ||| || || || || || |||| || ||| || |||||
Sbjct 24627287 ACAGATCCCTGTCTG-TCAAGTCTTTCAACAAATGAGGATTGACGACCTGGAATTCTCCA 24627345
Query 204209 GACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCG 204268
|| || || | | |||| | | |||| | ||| | || || | || |||||||||||
Sbjct 24627346 GAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTGTTGCCC 24627405
Query 204269 AAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACC 204327
||||| || ||||| || || ||||| || || || | || || ||||| |||||
Sbjct 24627406 AAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCGAACACC 24627464
>seq410
Length=4553683
Score = 87.8 bits (96), Expect = 3e-12
Identities = 120/165 (73%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273
||||||||||| | ||| | ||||| ||||||| ||| ||| ||||| | |||
Sbjct 2615933 GAGTACATTTCAGAGTGAATGTTTTCAATGGCCACCTGGAAGCCATAGAAGCAGCGAGCC 2615874
Query 160274 TCCAGATA-CTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332
| ||| | |||||| ||||| |||| | | | ||||||| |||| || | || ||
Sbjct 2615873 T-CAGTCACCTGCACTTCCTGGCTGAAACGCTCAACCAGATTCTCATTGACAATACCATC 2615815
Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTC 160377
| ||| |||||||| ||||| || || |||||||| || |||||
Sbjct 2615814 CGAGGCAGCAAAGAATGCCAAAACATGCGAGATGAAGTGCCTCTC 2615770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795094589294880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |