Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq158 100 2e-16
seq335 95.1 8e-15
>seq158
Length=288468
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|| |||||||| || | ||| ||||| || || || ||||||| |||| || ||
Sbjct 90319 CGAAGTACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAATCGGACAAAGTTCGCCCA 90260
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| || | ||| || || |||| ||||||||||||||||| | ||| | ||||| |||
Sbjct 90259 TCCTCGAGTTGCTTTCCAGCAAAGATTAAACGCTGCTGATCTGGGGGAATACCTTCCTTG 90200
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| || || || | | | | |||||| | | ||| || || | |||||
Sbjct 90199 TCTTGGATCTTAGCCTTTACGTTTTCAATTGTGTCGGAGGCTTCAACTTCAAGGGTAATG 90140
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| ||||| || ||||| ||||||||||| |||||
Sbjct 90139 GTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 90105
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
||||| || | || ||||||| ||| | ||| ||||| || ||||| || |||| |
Sbjct 91699 CCGCCACGAAGTCGTAGTACCAGATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGAC 91640
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || |||| || | || || || | ||||| ||||||||||| |||| |||
Sbjct 91639 AGAGTACGACCATCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGA 91580
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||| ||||| || || || | || | | ||||| | | ||| ||
Sbjct 91579 ATACCTTCCTTGTCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACT 91520
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| | ||||| || ||||| || | ||| ||||||||||| ||||||
Sbjct 91519 TCGAGGGTAATAGTCTTACCAGTCAGAGTCTTTACGAAGATTTGCATG 91472
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|| |||||||| || | ||| ||||| || ||||| || |||| || | || ||
Sbjct 90775 CGAAGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCA 90716
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| || | || || || | ||||| ||||||||||| |||| ||| | ||||| |||
Sbjct 90715 TCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTG 90656
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| || || || | || | | ||||| | | ||| || || | |||||
Sbjct 90655 TCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATA 90596
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| ||||| || | ||| ||||||||||| ||||||
Sbjct 90595 GTCTTACCAGTCAGAGTCTTTACGAAGATTTGCATG 90560
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|| |||||||| || | ||| ||||| || ||||| || |||| || | || ||
Sbjct 91231 CGAAGTACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGACAGAGTACGACCA 91172
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| || | || || || | ||||| ||||||||||| |||| ||| | ||||| |||
Sbjct 91171 TCTTCGAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCCGGGGGAATACCTTCCTTG 91112
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| || || || | || | | ||||| | | ||| || || | |||||
Sbjct 91111 TCTTGGATCTTAGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGGGTAATA 91052
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| ||||| || | ||| ||||||||||| ||||||
Sbjct 91051 GTCTTACCAGTCAGAGTCTTTACGAAGATTTGCATG 91016
>seq335
Length=1594555
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| | |||||| ||||| || | ||| || || || ||||| || || |
Sbjct 905129 CCTCCTCTTAGACGCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATATTGTAGTCAGAA 905070
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | ||| |||| || |||||||| || |||| || | |||||||||||| | ||
Sbjct 905069 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 905010
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| || |||||||| ||||| ||| | | | | ||||||| | |||||
Sbjct 905009 ATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTTTCAATGGTGTCTGAGGCCTCCACT 904950
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| ||| || ||||| || || || ||||| || |||||||||||
Sbjct 904949 TCCAGAGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCAT 904903
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| ||||| | ||| || || | ||| | ||| ||||||||| ||||| ||||| |
Sbjct 905814 GCCTCCTCGAAGACGAAGAACAAGATGGAGAGTTGATTCTTTTTGGATATTGTAATCTGA 905755
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
| | | |||| |||| ||| || || | ||||| | |||||| ||||| | ||
Sbjct 905754 TAGTGTTCTTCCATCTTCCAGTTGCTTTCCTGCGAAAATCAGACGCTGTTGATCTGGTGG 905695
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| ||||||||||| ||||| ||||| | | | || |||| ||| ||
Sbjct 905694 GATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGGTATCTGATGCTTCAAC 905635
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|||| ||| || |||||||| || | ||| ||||| || || ||||||
Sbjct 905634 CTCCAGAGTGATGGTTTTACCAGTCAGAGTCTTTACAAAAATTTGCATG 905586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347343783708434
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |