Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq236 100 2e-15 >seq236 Length=27037145 Score = 100 bits (110), Expect = 2e-15 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 870803 GTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACT 870862 || |||| ||| ||| ||| |||| |||||||||||| |||| ||||| || || || Sbjct 26037675 GTGGATTTTTCCAGTCCTAATGTTGCAAAAGAAATGCATGTTGGTCATTTGAGGTCTACC 26037616 Query 870863 ATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATT 870922 |||||||| || |||| | |||| ||| | | || || |||||| | | || Sbjct 26037615 ATTATTGGAGACAGTATTGCACGTTTATTGGAATTCTTAGGTCATGATGTTCTTAGGATC 26037556 Query 870923 AATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCT 870967 ||||| | || ||||||||||| ||||| || ||| |||||||| Sbjct 26037555 AATCACATTGGAGATTGGGGAACACAATTTGGAATGCTAATTGCT 26037511 Score = 91.5 bits (100), Expect = 1e-12 Identities = 230/349 (66%), Gaps = 3/349 (1%) Strand=Plus/Plus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 ||||| || ||||||||||| | ||| | || || || || | ||| | ||| Sbjct 16251146 TCAAAGTCCTCACCTCCCAAGTGAGTGTCACCGTTGGTGGCAACGACCTCGAAGACTCCG 16251205 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 | || | | || |||| | |||||| ||| |||||||||| || || | || || Sbjct 16251206 TTGTCGATGGTCAGAAGACTGACATCAAAGGTACCACCACCCAAGTCGAAGACGAGAACG 16251265 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 ||| | ||| ||| || || |||||||| || || | || || || || || || Sbjct 16251266 TTCTTCTCTCCGTC---CTTCTTGTCAAGACCGTAAGCGATGGCGGCGGCGGTGGGCTCG 16251322 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 || || || |||| || | ||||| | || |||| ||||| || |||||||| | Sbjct 16251323 TTGATGATCCTCATCACCTGGAGACCGGAGATGATTCCGGCATCCTTGGTGGCTTGCCGC 16251382 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 || | ||||| || || ||||| || || | ||||| | || || | ||||| | Sbjct 16251383 TGAGCGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAGG 16251442 Query 518327 TAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375 ||||| || |||| ||||| || | | || ||| | || |||| Sbjct 16251443 TAAGCCTCCGCGGTTTCCTTCATCTTTCCAAGAACCATAGCAGAGATTT 16251491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780519797153188