Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28]
6,098 sequences; 295,780,872 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq236 100 2e-15
>seq236
Length=27037145
Score = 100 bits (110), Expect = 2e-15
Identities = 121/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 870803 GTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACT 870862
|| |||| ||| ||| ||| |||| |||||||||||| |||| ||||| || || ||
Sbjct 26037675 GTGGATTTTTCCAGTCCTAATGTTGCAAAAGAAATGCATGTTGGTCATTTGAGGTCTACC 26037616
Query 870863 ATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATT 870922
|||||||| || |||| | |||| ||| | | || || |||||| | | ||
Sbjct 26037615 ATTATTGGAGACAGTATTGCACGTTTATTGGAATTCTTAGGTCATGATGTTCTTAGGATC 26037556
Query 870923 AATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCT 870967
||||| | || ||||||||||| ||||| || ||| ||||||||
Sbjct 26037555 AATCACATTGGAGATTGGGGAACACAATTTGGAATGCTAATTGCT 26037511
Score = 91.5 bits (100), Expect = 1e-12
Identities = 230/349 (66%), Gaps = 3/349 (1%)
Strand=Plus/Plus
Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086
||||| || ||||||||||| | ||| | || || || || | ||| | |||
Sbjct 16251146 TCAAAGTCCTCACCTCCCAAGTGAGTGTCACCGTTGGTGGCAACGACCTCGAAGACTCCG 16251205
Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146
| || | | || |||| | |||||| ||| |||||||||| || || | || ||
Sbjct 16251206 TTGTCGATGGTCAGAAGACTGACATCAAAGGTACCACCACCCAAGTCGAAGACGAGAACG 16251265
Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206
||| | ||| ||| || || |||||||| || || | || || || || || ||
Sbjct 16251266 TTCTTCTCTCCGTC---CTTCTTGTCAAGACCGTAAGCGATGGCGGCGGCGGTGGGCTCG 16251322
Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266
|| || || |||| || | ||||| | || |||| ||||| || |||||||| |
Sbjct 16251323 TTGATGATCCTCATCACCTGGAGACCGGAGATGATTCCGGCATCCTTGGTGGCTTGCCGC 16251382
Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326
|| | ||||| || || ||||| || || | ||||| | || || | ||||| |
Sbjct 16251383 TGAGCGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAGG 16251442
Query 518327 TAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375
||||| || |||| ||||| || | | || ||| | || ||||
Sbjct 16251443 TAAGCCTCCGCGGTTTCCTTCATCTTTCCAAGAACCATAGCAGAGATTT 16251491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780519797153188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |