Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3173 116 4e-21 seq1 87.8 2e-12 >seq3173 Length=1393 Score = 116 bits (128), Expect = 4e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 154962 TATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGT 155021 ||||||||||| || ||| | || ||||| || || | | | ||| | | |||| Sbjct 1 TATCTTGATGGCGCCAATATGAACGCACAAGTGGGCTTGACGACACCTGGCTATATTGGT 60 Query 155022 GCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGT 155081 |||||||| | || |||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct 61 GCAGATGTTTCCCACTTAAACTTACATAAAACTTTCTGTATTCCACATGGCGGTGGCGGT 120 Query 155082 CCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACCATTTGT 155128 || || | || || || ||||| ||||||| | |||||||||| Sbjct 121 CCGGGTATGGGACCAATTGGTGTTAAAAAACATTTAGCACCATTTGT 167 >seq1 Length=33571687 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 153906 GCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACA 153965 || || ||||||||||| ||||| ||||| || ||||| || || || ||||||||||| Sbjct 14573577 GCTCTCCAGACTAGAGAACAGCACATCAGAAGGGACAAGGCCACGAGCAACATCTGCACG 14573636 Query 153966 GCTCAGGCACTGCTGGCTAATATGTC 153991 |||||||| || ||||| || ||||| Sbjct 14573637 GCTCAGGCGCTACTGGCGAACATGTC 14573662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579168649504320