Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3173 118 1e-21 seq1 84.2 3e-11 >seq3173 Length=1393 Score = 118 bits (130), Expect = 1e-21 Identities = 129/170 (76%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 159637 TATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTAT--- 159693 ||||||||||| || ||| | || ||||| || || | | | ||| || |||| Sbjct 1 TATCTTGATGGCGCCAATATGAACGCACAAGTGGGCTTGACGACACC---TGGCTATATT 57 Query 159694 GGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGA 159753 ||||||||||| | || ||||||||||||| || ||||||||||||||||| ||||| Sbjct 58 GGTGCAGATGTTTCCCACTTAAACTTACATAAAACTTTCTGTATTCCACATGGCGGTGGC 117 Query 159754 GGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATTTGT 159803 ||||| || | || || |||||||| ||||||| | |||||||||| Sbjct 118 GGTCCGGGTATGGGACCAATTGGTGTTAAAAAACATTTAGCACCATTTGT 167 >seq1 Length=33571687 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 158581 GCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACA 158640 || || ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| Sbjct 14573577 GCTCTCCAGACTAGAGAACAGCACATCAGAAGGGACAAGGCCACGAGCAACATCTGCACG 14573636 Query 158641 GCACAAGCACTGCTGGCTAATATGTC 158666 || || || || ||||| || ||||| Sbjct 14573637 GCTCAGGCGCTACTGGCGAACATGTC 14573662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588006375797280